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Series GSE15097 Query DataSets for GSE15097
Status Public on Mar 01, 2010
Title High resolution genome wide DNA analysis on a large panel of Human Embryonic stem cell lines
Organism Homo sapiens
Experiment type Expression profiling by array
Genome variation profiling by SNP array
SNP genotyping by SNP array
Summary High resolution genome wide DNA analysis on a large panel of Human Embryonic stem cell lines reveals loss of heterozygosity and copy number variation changes associated with culture and affecting gene expression

This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series.
 
Contributor(s) Närvä E, Autio R
Citation(s) 20351689
Submission date Mar 04, 2009
Last update date Nov 27, 2018
Contact name Elisa Maarit Närvä
E-mail(s) elisa.narva@btk.fi
Organization name University of Turku
Department Turku Centre for Biotechnology
Lab Riitta Lahesmaa
Street address Tykistönkatu 6
City Turku
ZIP/Postal code 20520
Country Finland
 
Platforms (2)
GPL6801 [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array
GPL8238 [HuEx10stv2_Hs_ENSG] Affymetrix Human Exon 1.0 ST Array [Brainarray Version 11.0.1]
Samples (78)
GSM377500 human embryonic stem cells FES21 p51
GSM377501 human embryonic stem cells FES22 p41
GSM377502 human embryonic stem cells FES29 p37
This SuperSeries is composed of the following SubSeries:
GSE15095 Exon arrays for human embryonic stem cells
GSE15096 Affymetrix SNP 6.0 array data for human embryonic stem cell lines
Relations
BioProject PRJNA114881

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE15097_RAW.tar 3.0 Gb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file
Raw data provided as supplementary file

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