NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE155121 Query DataSets for GSE155121
Status Public on May 15, 2023
Title The Single-cell and spatial transcriptional landscape of human development
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The understanding of human early embryo developoment is very import for us to resovle the mysteries of how human organs especially the brain works and how human disease come up.Therefor, we carried out single cell RNA-seq and spatial transcriptional RNA-seq of human early embryo and analysed gene expression dynamics during the embryo development.We found some import genes and pathways that may control the ongoing of development.These findings help us make a step in understanding how we human being grow from a simple embryo to a complex one.
 
Overall design single-cell RNA-seq and spatial RNA-seq for early human embryo
 
Contributor(s) Liu Z, Zeng B, Zhong S, Wang X, Wu Q
Citation(s) 37192616
Submission date Jul 26, 2020
Last update date Aug 18, 2023
Contact name Zeyuan Liu
Organization name Institute of Biophysics,Chinese Academy of Sciences
Street address 15 Datun Road, Chaoyang District, Beijing, 100101, China
City Beijing
ZIP/Postal code 100101
Country China
 
Platforms (2)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (23)
GSM4695826 PCW3-01_whole_body_20190614
GSM4729674 PCW4-01_whole_body_20190920
GSM4729675 PCW4-02_whole_head_20190702
Relations
BioProject PRJNA648709
SRA SRP273612

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE155121_E10.5_mouse_whole_embryo_20200613_barcodes.tsv.gz 95.5 Kb (ftp)(http) TSV
GSE155121_E10.5_mouse_whole_embryo_20200613_features.tsv.gz 244.7 Kb (ftp)(http) TSV
GSE155121_E10.5_mouse_whole_embryo_20200613_matrix.mtx.gz 182.7 Mb (ftp)(http) MTX
GSE155121_E9.5_mouse_whole_embryo_20200613_barcodes.tsv.gz 118.0 Kb (ftp)(http) TSV
GSE155121_E9.5_mouse_whole_embryo_20200613_features.tsv.gz 244.7 Kb (ftp)(http) TSV
GSE155121_E9.5_mouse_whole_embryo_20200613_matrix.mtx.gz 197.1 Mb (ftp)(http) MTX
GSE155121_RAW.tar 780.7 Mb (http)(custom) TAR (of MTX, RDATA, TSV)
GSE155121_human_data_raw.h5ad.gz 2.5 Gb (ftp)(http) H5AD
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap
External link. Please review our privacy policy.