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Series GSE155209 Query DataSets for GSE155209
Status Public on Jul 28, 2020
Title Prognostic Molecular Biomarkers for Metastatic Progression in Stage I and II Clear Cell Renal Cell Carcinomas
Organism Homo sapiens
Experiment type Expression profiling by RT-PCR
Summary Presented is the differential expression of mRNA and miRNA in 44 Stage I and Stage II patients who developed metastasis within 5 years of nephrectomy, compared to 21 patients who remained disease free. Extracted RNA from nephrectomy specimens preserved in FFPE blocks was sequenced using RNAseq. MiRNA expression was done using the TaqMan OpenArray qPCR protocol.
 
Overall design Examination of molecular differences between metatstatic versus non-metatstatic in stage I and stage II
 
Contributor(s) Shih AJ, Zhu X
Citation(s) 32850445
Submission date Jul 27, 2020
Last update date Jun 12, 2023
Contact name Andrew Shih
E-mail(s) ashih@northwell.edu
Phone 516-562-2960
Organization name Feinstein Institute - Northwell Health
Street address 350 Community Dirive
City Mahasset
State/province NY
ZIP/Postal code 11030
Country USA
 
Platforms (1)
GPL18942 Applied Biosystems Taqman Low Density Array Human microRNA Card A+B Set v3.0
Samples (42)
GSM4697407 T1-1
GSM4697408 T1-2
GSM4697409 T1-3
This SubSeries is part of SuperSeries:
GSE155210 Prognostic Molecular Signatures and Biomarkers for Metastatic Progression in Stage I and II Clear Cell Renal Cell Carcinomas
Relations
BioProject PRJNA648973

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE155209_fold-change.txt.gz 2.8 Kb (ftp)(http) TXT
GSE155209_non-normalized.txt.gz 438.8 Kb (ftp)(http) TXT
GSE155209_processed_data.txt.gz 40.8 Kb (ftp)(http) TXT
Processed data are available on Series record

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