|
| Status |
Public on Sep 25, 2020 |
| Title |
Polyadenylation site mapping of xrn1∆ in Sacchromyces cerevisiae |
| Organism |
Saccharomyces cerevisiae |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
The use of alternative polyadenylation sites is common and affects the post-transcriptional fate of mRNA, including its stability, localization, and translation. Here we use the internal version of our previously developed protocol (PMID: 23295673), to characterize the polyA sites in a xrn1∆ strain.
|
| |
|
| Overall design |
PolyA tail mapping at high resolution of a XRN1 deletion strain, with two biological replicates.
|
| |
|
| Contributor(s) |
Pelechano V, Wilkening S, Järvelin A, Steinmetz LM |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Sep 24, 2020 |
| Last update date |
Sep 27, 2020 |
| Contact name |
Vicent Pelechano |
| E-mail(s) |
vicente.pelechano.garcia@ki.se
|
| Organization name |
ScilifeLab - Karolinska Institutet
|
| Department |
MTC
|
| Street address |
Nobels väg 16
|
| City |
Solna |
| ZIP/Postal code |
SE-17177 |
| Country |
Sweden |
| |
|
| Platforms (1) |
| GPL13821 |
Illumina HiSeq 2000 (Saccharomyces cerevisiae) |
|
| Samples (2) |
|
| Relations |
| BioProject |
PRJNA665542 |
| SRA |
SRP285324 |
