|
| Status |
Public on Aug 04, 2022 |
| Title |
The pseudouridine synthase DKC1 binds to cytoplasmic transcripts containing H/ACA-box SnoRNA sequences affecting nuclear hormone receptor dependence [RIP-seq] |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
RIP-seq of DKC1 in MCF7 cells
|
| |
|
| Overall design |
5 biological samples per condition are used. A total of 15 samples were used: 5 cytosol input, 5 cytosol IgG RIP, 5 cytosol DKC1 RIP
|
| |
|
| Contributor(s) |
Zacchini F, Inga A, Dassi E, Montanaro L |
| Citation(s) |
35996163 |
| |
| Submission date |
Nov 13, 2020 |
| Last update date |
Aug 31, 2022 |
| Contact name |
Erik Dassi |
| E-mail(s) |
erik.dassi@unitn.it
|
| Organization name |
University of Trento
|
| Department |
CIBIO
|
| Street address |
Via Sommarive, 9
|
| City |
Trento |
| State/province |
TN |
| ZIP/Postal code |
38123 |
| Country |
Italy |
| |
|
| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
|
| Samples (15)
|
|
| This SubSeries is part of SuperSeries: |
| GSE161481 |
The pseudouridine synthase DKC1 binds to cytoplasmic transcripts containing H/ACA-box SnoRNA sequences affecting nuclear hormone receptor dependence |
|
| Relations |
| BioProject |
PRJNA678371 |
| SRA |
SRP292547 |
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