NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE162261 Query DataSets for GSE162261
Status Public on Oct 31, 2021
Title Expression data from differentiated THP-1 (dTHP-1) cell line infected with influenza A virus (IAV) and treated with/without Itaconate
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Analysis of gene expression indTHP-1 cells infected with influenza A virus or Mock and treated with Itaconic acid (IA), or Dimethyl itaconate (DI) to investigate the effects itaconate have on transcriptional response in dTHP-1 cells.
We particularly looked at anti-inflammatory effects of itaconate in inflammation followed by Influenza A virus infection.
 
Overall design THP1-1 cells were differentiated by phorbol 12-myristate-13-acetate. dTHP-1 cells were infected with influenza A viruses, or non-infected (Mock) for 12 hours. Infected dTHP-1 cells were pre-treated with itaconic acid, or dimethyl itaconate for 24 hours and then an additional 12 hours treatment along with IAV infection. RNA was extracted, and subjected to transcriptome profiling array Clariomâ„¢ S Assay, human.
 
Contributor(s) Pessler F, Geffers R
Citation(s) 35025971
Submission date Nov 27, 2020
Last update date Jan 30, 2022
Contact name Frank Pessler
E-mail(s) frank.pessler@twincore.de
Phone +49(511)220027167
Organization name Center for Experimental and Clinical Infection Research GmbH
Department Experimental Infection Research
Lab Research Group Biomarkers for Infectious Diseases
Street address Feodor-Lynen-Str. 7-9
City Hannover
ZIP/Postal code 30625
Country Germany
 
Platforms (1)
GPL23159 [Clariom_S_Human] Affymetrix Clariom S Assay, Human (Includes Pico Assay)
Samples (18)
GSM4948003 Uninfected untreated rep 1
GSM4948004 Uninfected untreated rep 2
GSM4948005 Uninfected untreated rep 3
Relations
BioProject PRJNA681211

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE162261_RAW.tar 20.9 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap