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Status |
Public on Mar 23, 2021 |
Title |
BK5.ATF3-induced mammary tumors compared to normal mammary glands |
Platform organisms |
Mus musculus; Murid betaherpesvirus 1; Murid gammaherpesvirus 4 |
Sample organism |
Mus musculus |
Experiment type |
Non-coding RNA profiling by array
|
Summary |
Transcriptional profiling of mammary tumors that occur in parous, BK5.ATF3 mice, compared to normal mammary tissue
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Overall design |
Two-condition experiment, BK5.ATF3-induced mammary tumors v. adjacent normal mammary glands. Biological replicates: 3 tumors, 3 paired normal glands. One replicate per array.
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Contributor(s) |
Shen J, MacLeod MC, Yan L |
Citation(s) |
33652981 |
|
Submission date |
Dec 07, 2020 |
Last update date |
Mar 25, 2021 |
Contact name |
Yue Lu |
E-mail(s) |
ylu4@mdanderson.org
|
Phone |
7135637960
|
Organization name |
The University of Texas MD Anderson Cancer Center
|
Department |
Epigenetics & Molecular Carcinogenesis
|
Street address |
1881 East Road
|
City |
Houston |
State/province |
TX |
ZIP/Postal code |
77054 |
Country |
USA |
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Platforms (1) |
GPL29478 |
miRCURY LNA microRNA Array, v.10.0 - hsa, mmu & rno (miRBase v10.1) |
|
Samples (7)
|
GSM4959973 |
Mammary tumor vs. adjacent normal mammary gland, replicate 1. |
GSM4959974 |
Mammary tumor vs. adjacent normal mammary gland, replicate 1 dye swap |
GSM4959975 |
Mammary tumor vs. adjacent normal mammary gland, replicate 2. |
GSM4959976 |
Mammary tumor vs. adjacent normal mammary gland, replicate 2 dye swap |
GSM4959977 |
Mammary tumor vs. adjacent normal mammary gland, replicate 3. |
GSM4959978 |
Mammary tumor vs. adjacent normal mammary gland, replicate 3 dye swap |
GSM4959979 |
Mammary tumor vs. adjacent normal mammary gland, replicate 4. |
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Relations |
BioProject |
PRJNA683036 |