|
| Status |
Public on Mar 23, 2021 |
| Title |
BK5.ATF3-induced mammary tumors compared to normal mammary glands |
| Platform organisms |
Mus musculus; Murid betaherpesvirus 1; Murid gammaherpesvirus 4 |
| Sample organism |
Mus musculus |
| Experiment type |
Non-coding RNA profiling by array
|
| Summary |
Transcriptional profiling of mammary tumors that occur in parous, BK5.ATF3 mice, compared to normal mammary tissue
|
| |
|
| Overall design |
Two-condition experiment, BK5.ATF3-induced mammary tumors v. adjacent normal mammary glands. Biological replicates: 3 tumors, 3 paired normal glands. One replicate per array.
|
| |
|
| Contributor(s) |
Shen J, MacLeod MC, Yan L |
| Citation(s) |
33652981 |
| |
| Submission date |
Dec 07, 2020 |
| Last update date |
Mar 25, 2021 |
| Contact name |
Yue Lu |
| E-mail(s) |
ylu4@mdanderson.org
|
| Phone |
7135637960
|
| Organization name |
The University of Texas MD Anderson Cancer Center
|
| Department |
Epigenetics & Molecular Carcinogenesis
|
| Street address |
1881 East Road
|
| City |
Houston |
| State/province |
TX |
| ZIP/Postal code |
77054 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL29478 |
miRCURY LNA microRNA Array, v.10.0 - hsa, mmu & rno (miRBase v10.1) |
|
| Samples (7)
|
| GSM4959973 |
Mammary tumor vs. adjacent normal mammary gland, replicate 1. |
| GSM4959974 |
Mammary tumor vs. adjacent normal mammary gland, replicate 1 dye swap |
| GSM4959975 |
Mammary tumor vs. adjacent normal mammary gland, replicate 2. |
| GSM4959976 |
Mammary tumor vs. adjacent normal mammary gland, replicate 2 dye swap |
| GSM4959977 |
Mammary tumor vs. adjacent normal mammary gland, replicate 3. |
| GSM4959978 |
Mammary tumor vs. adjacent normal mammary gland, replicate 3 dye swap |
| GSM4959979 |
Mammary tumor vs. adjacent normal mammary gland, replicate 4. |
|
| Relations |
| BioProject |
PRJNA683036 |
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