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Series GSE163119 Query DataSets for GSE163119
Status Public on Dec 10, 2021
Title The landscape of H3K4me3 associated interactions between chromatin and RNAs in rice.
Organism Oryza sativa
Experiment type Other
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 35115727
Submission date Dec 13, 2020
Last update date Feb 08, 2022
Contact name Xingyu Huang
E-mail(s) xingyu.huang@zju.edu.cn
Phone +86 18271392250
Organization name Life Sciences Institute (LSI), Zhejiang University (ZJU)
Lab Yijun Ruan
Street address 866 Yuhangtang Road, Hangzhou, Zhejiang Province
City Hangzhou
State/province Zhejiang
ZIP/Postal code 310058
Country China
 
Platforms (1)
GPL24468 HiSeq X Ten (Oryza sativa)
Samples (14)
GSM4972191 H3K4me3_ChRD_rep1
GSM4972192 H3K4me3_ChRD_rep2
GSM4972193 MH63 seedling_totalRNA_rep1
This SuperSeries is composed of the following SubSeries:
GSE163115 The landscape of H3K4me3 associated interactions between chromatin and RNAs in rice [ChRD-PET]
GSE163116 The landscape of H3K4me3 associate interactions between chromatin and RNAs in rice [RNA-seq]
GSE163117 The landscape of H3K4me3 associated interactions between chromatin and RNAs in rice [ATAC-seq]
Relations
BioProject PRJNA684927

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE163119_RAW.tar 1.7 Gb (http)(custom) TAR (of BW, TXT)
SRA Run SelectorHelp

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