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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jan 04, 2018 |
| Title |
HiSeq X Ten (Oryza sativa) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organism |
Oryza sativa |
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| Submission date |
Jan 04, 2018 |
| Last update date |
Jan 04, 2018 |
| Contact name |
GEO |
| Country |
USA |
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| Samples (1248)
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GSM2913134, GSM2913135, GSM2913136, GSM2913194, GSM2913195, GSM2913196
GSM3045538, GSM3045539, GSM3045540, GSM3045541, GSM3045542, GSM3045543, GSM3045545, GSM3063021, GSM3063022, GSM3063024, GSM3063025, GSM3103229, GSM3103230, GSM3103231, GSM3103232, GSM3103233, GSM3103234, GSM3103235, GSM3103236, GSM3103237, GSM3103238, GSM3103239, GSM3103240, GSM3103241, GSM3103242, GSM3103243, GSM3119191, GSM3119192, GSM3119193, GSM3119194, GSM3132615, GSM3132616, GSM3132617, GSM3132618, GSM3132619, GSM3132620, GSM3132621, GSM3132622, GSM3132623, GSM3132624, GSM3132625, GSM3132626, GSM3243301, GSM3243302, GSM3243303, GSM3243304, GSM3243305, GSM3243306, GSM3243307, GSM3243308, GSM3243444, GSM3243445, GSM3243446, GSM3273163, GSM3273164, GSM3273165, GSM3421564, GSM3421565, GSM3421566, GSM3421567, GSM3421568, GSM3421569, GSM3421570, GSM3421571, GSM3421572, GSM3421573, GSM3430618, GSM3430619, GSM3430620, GSM3430621, GSM3430622, GSM3430623, GSM3430698, GSM3430699, GSM3430700, GSM3430701, GSM3578147, GSM3578148, GSM3578149, GSM3578150, GSM3578151, GSM3578152, GSM3578153, GSM3578154, GSM3578155, GSM3578156, GSM3578157, GSM3578158, GSM3578159, GSM3578160, GSM3578161, GSM3578162, GSM3578163, GSM3578164, GSM3640103, GSM3728903, GSM3728904, GSM3728905, GSM3728906, GSM3733323, GSM3733324, GSM3733325, GSM3733326, GSM3733327, GSM3733328, GSM3733329, GSM3733330, GSM3733331, GSM3733332, GSM3733333, GSM3733334, GSM3733335, GSM3733336, GSM3733337, GSM3783665, GSM3783666, GSM3831427, GSM3831430, GSM3831433, GSM3831436, GSM3831439, GSM3831442, GSM3851666, GSM3851667, GSM4061843, GSM4061844, GSM4061845, GSM4061846, GSM4061847, GSM4061848, GSM4061849, GSM4061850, GSM4061851, GSM4061852, GSM4061853, GSM4061854, GSM4061855, GSM4061856, GSM4061857, GSM4061858, GSM4061859, GSM4061860, GSM4061861, GSM4061862, GSM4061863, GSM4116483, GSM4116484, GSM4116485, GSM4116486, GSM4116487, GSM4116488, GSM4116489, GSM4116490, GSM4116491, GSM4116492, GSM4116493, GSM4116494, GSM4116495, GSM4116496, GSM4116497, GSM4116498, GSM4116499, GSM4116500, GSM4116501, GSM4116502, GSM4116503, GSM4116504, GSM4116505, GSM4116506, GSM4116507, GSM4116508, GSM4116509, GSM4116510, GSM4116511, GSM4116512, GSM4116513, GSM4116514, GSM4116515, GSM4116516, GSM4116517, GSM4116518, GSM4116519, GSM4116520, GSM4116521, GSM4116522, GSM4116523, GSM4116524, GSM4116525, GSM4116526, GSM4116527, GSM4116528, GSM4116529, GSM4116530, GSM4116531, GSM4116532, GSM4116533, GSM4116534, GSM4116535, GSM4116536, GSM4116537, GSM4116538, GSM4116539, GSM4116540, GSM4116541, GSM4116542, GSM4116543, GSM4116544, GSM4116545, GSM4227772, GSM4227773, GSM4227774, GSM4227775, GSM4227776, GSM4227777, GSM4227778, GSM4227779, GSM4227780, GSM4227781, GSM4227782, GSM4227783, GSM4227784, GSM4227785, GSM4227786, GSM4227787, GSM4227788, GSM4227789, GSM4227790, GSM4227791, GSM4227792, GSM4227793, GSM4227794, GSM4227795, GSM4227796, GSM4227797, GSM4227798, GSM4227799, GSM4227800, GSM4227801, GSM4227802, GSM4227803, GSM4227804, GSM4227805, GSM4227806, GSM4227807, GSM4227808, GSM4227809, GSM4227810, GSM4227811, GSM4227812, GSM4227813, GSM4227814, GSM4227815, GSM4227816, GSM4227817, GSM4227818, GSM4227819, GSM4227820, GSM4227821, GSM4227822, GSM4227823, GSM4227824, GSM4227825, GSM4227826, GSM4227827, GSM4227828, GSM4227829, GSM4227830, GSM4227831, GSM4227832, GSM4227833, GSM4227834, GSM4227835, GSM4227836, GSM4227837, GSM4227838, GSM4227839, GSM4227840, GSM4227841, GSM4227842, GSM4227843, GSM4227844, GSM4227845, GSM4227846, GSM4227847, GSM4227848, GSM4227849, GSM4227850, GSM4227851, GSM4227852, GSM4227853, GSM4227854, GSM4227855, GSM4227856, GSM4227857, GSM4227858, GSM4227859, GSM4227860, GSM4227861, GSM4227862, GSM4227863, GSM4227864, GSM4227865, GSM4227866, GSM4227867, GSM4227868, GSM4227869, GSM4227870, GSM4227871, GSM4227872, GSM4227873, GSM4227874, GSM4227875, GSM4227876, GSM4227877, GSM4227878, GSM4227879, GSM4227880, GSM4227881, GSM4227882, GSM4227883, GSM4227884, GSM4227885, GSM4227886, GSM4227887, GSM4227888, GSM4227889, GSM4227890, GSM4227891, GSM4227892, GSM4227893, GSM4227894, GSM4227895, GSM4227896, GSM4227897, GSM4227898, GSM4227899, GSM4227900, GSM4227901, GSM4227902, GSM4227903, GSM4227904, GSM4227905, GSM4227906, GSM4227907, GSM4227908, GSM4227909, GSM4227910, GSM4227911, GSM4227912, GSM4227913, GSM4227914, GSM4227915, GSM4227916, GSM4227917, GSM4227918, GSM4227919, GSM4227920, GSM4227921, GSM4227922, GSM4227923, GSM4227924, GSM4227925, GSM4227926, GSM4227927, GSM4227928, GSM4227929, GSM4227930, GSM4227931, GSM4227932, GSM4227933, GSM4227934, GSM4227935, GSM4227936, GSM4227937, GSM4227938, GSM4227939, GSM4227940, GSM4227941, GSM4227942, GSM4227943, GSM4227944, GSM4227945, GSM4227946, GSM4227947, GSM4227948, GSM4227949, GSM4227950, GSM4227951, GSM4227952, GSM4227953, GSM4227954, GSM4227955, GSM4227956, GSM4227957, GSM4227958, GSM4227959, GSM4227960, GSM4227961, GSM4227962, GSM4227963, GSM4227964, GSM4227965, GSM4227966, GSM4227967, GSM4227968, GSM4227969, GSM4227970, GSM4227971, GSM4227972, GSM4227973, GSM4227974, GSM4227975, GSM4227976, GSM4227977, GSM4227978, GSM4227979, GSM4227980, GSM4227981, GSM4227982, GSM4227983, GSM4227984, GSM4227985, GSM4227986, GSM4227987, GSM4227988, GSM4227989, GSM4227990, GSM4227991, GSM4227992, GSM4227993, GSM4227994, GSM4227995, GSM4227996, GSM4227997, GSM4227998, GSM4227999, GSM4228000, GSM4228001, GSM4228002, GSM4228003, GSM4228004, GSM4228005, GSM4228006, GSM4228007, GSM4228008, GSM4228009, GSM4228010, GSM4228011, GSM4228012, GSM4228013, GSM4228014, GSM4228015, GSM4228016, GSM4228017, GSM4228018, GSM4228019, GSM4228020, GSM4228021, GSM4228022, GSM4228023, GSM4228024, GSM4228025, GSM4228026, GSM4228027, GSM4228028, GSM4228029, GSM4228030, GSM4228031, GSM4228032, GSM4228033, GSM4228034, GSM4228035, GSM4228036, GSM4228037, GSM4228038, GSM4228039, GSM4228040, GSM4228041, GSM4228042, GSM4228043, GSM4228044, GSM4228045, GSM4228046, GSM4228047, GSM4228048, GSM4228049, GSM4228050, GSM4228051, GSM4228052, GSM4228053, GSM4228054, GSM4228055, GSM4228056, GSM4228057...
Accession list truncated, click here to browse through all related public accessions
You can also download a list of all accessions here
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| Series (81)
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| GSE108777 |
N6-Methyladenine DNA Methylation in Japonica and Indica Rice Genomes and Its Association with Gene Expression, Plant Development, and Stress Responses [MeDIP-seq 93-11] |
| GSE108781 |
N6-Methyladenine DNA Methylation in Japonica and Indica Rice Genomes and Its Association with Gene Expression, Plant Development, and Stress Responses [MeDIP-seq Nipponbare] |
| GSE108784 |
N6-Methyladenine DNA Methylation in Japonica and Indica Rice Genomes and Its Association with Gene Expression, Plant Development, and Stress Responses |
| GSE111944 |
Characterization of functional relationships of R-loops with gene transcription and epigenetic modifications in rice |
| GSE112256 |
Reinforcement of DNA methylation in CHH context through RNA-directed DNA methylation ensures sexual reproduction in rice [RNA-seq] |
| GSE112259 |
Reinforcement of DNA methylation in CHH context through RNA-directed DNA methylation ensures sexual reproduction in rice |
| GSE113319 |
Specific combinatorial mutations in MIR396 genes enlarge the grain size and modulate the plant architecture in rice |
| GSE113769 |
Characterization of imprinted genes in rice reveals regulation and imprinting conservation at some loci in plant species |
| GSE114090 |
ATAC-seq profiling of open chromatin with global epigenetic and transcriptional trends in two-line hybrid rice |
| GSE116581 |
fruitENCODE: An encyclopedia of DNA elements for fruit ripening |
| GSE117187 |
Whole-genome bisulfite sequencing of wild-type and thick aleurone 2-1 (ta2-1) mutant in rice |
| GSE120922 |
R-loop landscapes in Rice (Oryza sativa) [DRIP-seq] |
| GSE121269 |
N6-Methyladenine DNA Methylation in Japonica and Indica Rice Genomes and Its Association with Gene Expression, Plant Development, and Stress Responses [RNA-seq] |
| GSE121274 |
N6-Methyladenine DNA Methylation in Japonica and Indica Rice Genomes and Its Association with Gene Expression, Plant Development, and Stress Responses [BiSulfite-seq] |
| GSE125608 |
Profiling expression of coding genes, long noncoding RNAs, and circular RNAs in the rice photo-thermosensitive genic male sterile line Wuxiang S |
| GSE129979 |
Antibody-free enzyme-assisted chemical approach for detection of N6-methyladenosine |
| GSE130165 |
Reinforcement of DNA methylation in CHH context through RNA-directed DNA methylation ensures sexual reproduction in rice [RNA-seq] |
| GSE130166 |
Reinforcement of DNA methylation in CHH context through RNA-directed DNA methylation ensures sexual reproduction in rice [sRNA-seq] |
| GSE130167 |
Reinforcement of DNA methylation in CHH context through RNA-directed DNA methylation ensures sexual reproduction in rice [Bisulfite-seq] |
| GSE130168 |
Reinforcement of DNA methylation in CHH context through RNA-directed DNA methylation ensures sexual reproduction in rice |
| GSE131517 |
Comparative de novo mRNA transcriptome analysis of Oryza sativa cv. IR-64 under control and fluoride stress |
| GSE131641 |
CircRNAs function as a new layer of regulation in rice-Magnaporthe oryzae interaction |
| GSE132153 |
Screening Salinity Tolerance and Transcriptome Analysis in Rice (Oryza sativa L.) |
| GSE136918 |
Knocking out a negative regulator of photosynthesis 1 (NRP1) increases rice leaf photosynthesis and biomass production in the field |
| GSE138705 |
Multiplex genome editing uncovers a class of non-CG methylation specific for GC-rich regions in rice |
| GSE142462 |
Integrative analysis of reference epigenomes in rice [ChIP-seq] |
| GSE142470 |
Integrative analysis of reference epigenomes in rice [RNA-seq] |
| GSE142501 |
Integrative analysis of reference epigenomes in rice [FAIRE-seq] |
| GSE142568 |
Integrative analysis of reference epigenomes in rice [BiSulfite-seq] |
| GSE142569 |
Integrative analysis of reference epigenomes in rice [ChIP-reChIP-seq] |
| GSE142570 |
Integrative analysis of reference epigenomes in rice |
| GSE143259 |
Over-expression of a transcription factor mEmBP-1a increases rice photosynthesis, biomass and yield by regulating the expression of multiple key photosynthesis genes |
| GSE143718 |
Diurnal 3D genome organization remodeling orchestrates rhythmic gene expression in rice [RNA-Seq] |
| GSE143719 |
Diurnal 3D genome organization remodeling orchestrates rhythmic gene expression in rice [ChIP-Seq] |
| GSE143721 |
Diurnal 3D genome organization remodeling orchestrates rhythmic gene expression in rice [ChIA-PET] |
| GSE143722 |
Diurnal 3D genome organization remodeling orchestrates rhythmic gene expression in rice [DAP-seq] |
| GSE143723 |
Diurnal 3D genome organization remodeling orchestrates rhythmic gene expression in rice [FAIRE-seq] |
| GSE143724 |
Diurnal 3D genome organization remodeling orchestrates rhythmic gene expression in rice |
| GSE144562 |
Reorganization of 3D chromatin architecture of rice genomes during heat stress (Bisulfite-seq) |
| GSE144563 |
Reorganization of 3D chromatin architecture of rice genomes during heat stress (MeDIP-Seq) |
| GSE144564 |
Reorganization of 3D chromatin architecture of rice genomes during heat stress (ATAC-Seq) |
| GSE144565 |
Reorganization of 3D chromatin architecture of rice genomes during heat stress (HiC) |
| GSE144566 |
Reorganization of 3D chromatin architecture of rice genomes during heat stress (RNA-Seq) |
| GSE144729 |
Genome-wide transcriptomic analysis reveals the gene regulatory network that controlled by SRL1 in regulating rice leaf rolling |
| GSE145579 |
Transcriptome Analysis of Wild Type and OsMYB305 Overexpressed Rice |
| GSE146033 |
Single-cell transcriptomic analysis of rice root tips [bulk RNA-seq] |
| GSE146034 |
Single-cell transcriptomic analysis of rice root tips [scRNA-seq] |
| GSE146035 |
Single-cell transcriptomic analysis of rice root tips |
| GSE148299 |
Morphological and physiological factors contributing to stronger early vigor in the elite rice cultivar 9311 compared to Huanghuazhan (HHZ) |
| GSE149101 |
RNA-seq analysis of NIL-GAF1 and NIL-gaf1 grains of 15 DAF at filling stage |
| GSE149800 |
21-nt phasiRNAs direct target mRNA cleavage in rice male germ cells |
| GSE151938 |
Round 1 RNA-sequencing analysis of the OsIMA overexpression and knockdown rice lines and Fe deficiency responsiveness of non-transformant (NT) rice. |
| GSE151941 |
RNA-sequencing analysis of the OsIMA overexpression and knockdown rice lines and Fe deficiency responsiveness of non-transformant (NT) rice |
| GSE152152 |
Reinforcement of DNA methylation in CHH context through RNA-directed DNA methylation ensures sexual reproduction in rice [Bisulfite-seq] |
| GSE152153 |
Reinforcement of DNA methylation in CHH context through RNA-directed DNA methylation ensures sexual reproduction in rice [RNA-seq] |
| GSE152155 |
Reinforcement of DNA methylation in CHH context through RNA-directed DNA methylation ensures sexual reproduction in rice |
| GSE158710 |
The effect of RNA polymerase V on 24-nt siRNA accumulation depends on DNA methylation contexts and histone modifications in rice [Bisulfite-Seq] |
| GSE158711 |
The effect of RNA polymerase V on 24-nt siRNA accumulation depends on DNA methylation contexts and histone modifications in rice |
| GSE163115 |
The landscape of H3K4me3 associated interactions between chromatin and RNAs in rice [ChRD-PET] |
| GSE163116 |
The landscape of H3K4me3 associate interactions between chromatin and RNAs in rice [RNA-seq] |
| GSE163117 |
The landscape of H3K4me3 associated interactions between chromatin and RNAs in rice [ATAC-seq] |
| GSE163118 |
The landscape of H3K4me3 associate interactions between chromatin and RNAs in rice [ssDRIP-seq] |
| GSE163119 |
The landscape of H3K4me3 associated interactions between chromatin and RNAs in rice. |
| GSE166613 |
Diurnal 3D genome organization remodeling orchestrates rhythmic gene expression in rice [BiSulfite-seq] |
| GSE167877 |
RNA-seq analysis of TP309, rod1 and ROD1-OE leaves at tillering stage and inflorescence meristem at filling stage |
| GSE169377 |
OsNF-YB1 acts in the regulation of RGB1 on grain development and starch accumulation through activation of OsYUC11-mediated auxin biosynthesis in rice endosperm cells |
| GSE173850 |
Next Generation Sequencing of transcript abundance in rice inoculated with Magnaporthe oryzae under 22℃ and 28℃ |
| GSE175987 |
RNA-sequencing analysis of the OsbZIP83 overexpression rice lines. |
| GSE178359 |
Transcriptome analysis of axillary meristems of rice |
| GSE181713 |
Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and osmads58-/- Panicles Transcriptomes |
| GSE198135 |
APIP5 functions as a transcription factor and an RNA-binding protein to modulate cell death and immunity in rice. |
| GSE211952 |
RNA-Seq and genome-wide association analysis were utilized to find potential genes for rice seed shattering |
| GSE215853 |
FEM2 regulates the whole genome 24-nt siRNA accumulation and CHH DNA methylation in rice [RNA-Seq] |
| GSE215855 |
FEM2 regulates the whole genome 24-nt siRNA accumulation and CHH DNA methylation in rice [Bisulfite-Seq] |
| GSE215857 |
FEM2 regulates the whole genome 24-nt siRNA accumulation and CHH DNA methylation in rice |
| GSE217602 |
Evolution of lmiRNAs and their targets from MITEs for rice adaptation |
| GSE218345 |
RNA-seq analysis of genes involved in flag leaf photosynthesis regulation at filling stage |
| GSE242453 |
H3K9ac-marked three-dimensional genome dynamics in rice under drought stress [ChIP-Seq] |
| GSE242455 |
H3K9ac-marked three-dimensional genome dynamics in rice under drought stress [ChIA-PET] |
| GSE242459 |
H3K9ac-marked three-dimensional genome dynamics in rice under drought stress [RNA-Seq] |
| GSE242460 |
H3K9ac-marked three-dimensional genome dynamics in rice under drought stress |
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| Supplementary data files not provided |
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