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Series GSE164861 Query DataSets for GSE164861
Status Public on Mar 05, 2021
Title Epigenetic reprogramming of host and viral genes by Human Cytomegalovirus infection in Kasumi-3 myeloid progenitor cells at early times post-infection
Organisms Homo sapiens; Human betaherpesvirus 5
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 33731453
NIH grant(s)
Grant ID Grant title Affiliation Name
P01 AI112522 Integrating Mechanistic Insights from Diverse Models to Prevent CMV Reactivation following Transplantation NORTHWESTERN UNIVERSITY AT CHICAGO MARY A HUMMEL
Submission date Jan 14, 2021
Last update date Jul 09, 2021
Contact name Mary Hummel
E-mail(s) m-hummel@northwestern.edu
Phone 847-322-6438
Organization name Northwestern University
Street address 303 E. Chicago Ave
City Chicago
State/province IL
ZIP/Postal code 60611
Country USA
 
Platforms (6)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
GPL24958 Illumina NextSeq 500 (Homo sapiens; Human betaherpesvirus 5)
Samples (79)
GSM5020839 24hr_K3_Uninfected_Sorted_Rep1
GSM5020840 24hr_K3_Uninfected_Sorted_Rep2
GSM5020841 24hr_K3_Infected_Sorted_Rep1
This SuperSeries is composed of the following SubSeries:
GSE164839 Transcriptome analysis of HCMV infected and mock-infected Kasumi-3 cells at 24 hours post infection
GSE164840 Viral transcriptome analysis of HCMV infected Kasumi-3 cells at early time post infection
GSE164841 Chromatin accessibilty analysis of HCMV infected and mock-infected Kasumi-3 cells at 24 hours post infection
Relations
BioProject PRJNA692214

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE164861_RAW.tar 12.8 Gb (http)(custom) TAR (of BIGWIG, TXT)
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