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| Status |
Public on Mar 01, 2021 |
| Title |
The lncRNA APOLO and the methylcytosine-binding protein VIM1 are thermomorphogenesis regulators |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We compared the change of transcriptome induced by the over expression of the lncRNA APOLO, the downregulation of the methylcytosine-binding protein VIM1 and the increased temperature of growth. A correlation of up- and down-regulated genes in WT in response to 29°C is observed for OE APOLO-1 and vim1-3 at 23°C.
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| |
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| Overall design |
4-day-old Col, 35S:APOLO or vim1-3 seedlings growing at 23°C or 29°C were analyzed for RNA-Seq in triplicates
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| |
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| Contributor(s) |
Fonouni-Farde C, Christ A, Blein T, Ariel F |
| Citation(s) |
36038910 |
| |
| Submission date |
Feb 28, 2021 |
| Last update date |
Sep 15, 2022 |
| Contact name |
Thomas Blein |
| E-mail(s) |
thomas.blein@cnrs.fr
|
| Organization name |
CNRS
|
| Lab |
IPS2
|
| Street address |
rue de Noetzlin
|
| City |
Gif-sur-Yvette |
| ZIP/Postal code |
91190 |
| Country |
France |
| |
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| Platforms (1) |
| GPL19580 |
Illumina NextSeq 500 (Arabidopsis thaliana) |
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| Samples (12)
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| Relations |
| BioProject |
PRJNA705455 |
| SRA |
SRP308553 |
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