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Series GSE168290 Query DataSets for GSE168290
Status Public on Aug 18, 2021
Title NOT proteins in co-translation decay
Organism Saccharomyces cerevisiae
Experiment type Other
Summary The goal is to compare role of Not1,4,5 in co-translational decay from soluble and total RNA pools using null and degron strains
 
Overall design The cells are grown exponentially and total RNA is prepared by acid phenol extraction from cell pellets or from cell lysates prepared as for polysome profiling
 
Contributor(s) Allen G, Weiss B, Huch S, Pelechano V, Collart MA
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Submission date Mar 04, 2021
Last update date Aug 21, 2021
Contact name George Allen
Organization name University of Geneva
Street address Rue Michel-Servet 1
City Geneve
State/province Geneve
ZIP/Postal code 1206
Country Switzerland
 
Platforms (1)
GPL19756 Illumina NextSeq 500 (Saccharomyces cerevisiae)
Samples (30)
GSM5135783 not4∆_sol01_SC_SP_TAATGT
GSM5135784 not4∆_sol02_SC_SP_CTACAC
GSM5135785 not4∆_sol03_SC_SP_GACTAG
Relations
BioProject PRJNA706755
SRA SRP309367

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE168290_RAW.tar 33.2 Mb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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