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Series GSE174156 Query DataSets for GSE174156
Status Public on Dec 05, 2021
Title RNA-Seq analysis of hearts in foxc1anju18 mutants and WT zebrafish embryos
Organism Danio rerio
Experiment type Expression profiling by high throughput sequencing
Summary The goal of this study is to compare the relative expression genes in hearts of foxc1a-null mutants and WT siblings. 96hpf hearts of foxc1anju18 and WT siblings were dissected for total RNA extraction. RNA profiles were generated using Illumina deep sequencing. Our study represents the reduced expression of several trabeculation related signaling pathways and cell processes.
 
Overall design Cardiac mRNA profiles of 96hpf wild-type and foxc1anju18 zebrafish embryos.
 
Contributor(s) He L, Zhao Q
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Submission date May 10, 2021
Last update date Dec 05, 2021
Contact name Luqingqing He
Organization name Model Animal Research Center
Street address 12 Xuefu Road, Pukou High-tech Development Zone
City Nanjing
ZIP/Postal code 210061
Country China
 
Platforms (1)
GPL24995 Illumina NovaSeq 6000 (Danio rerio)
Samples (2)
GSM5288081 foxc1a-h-96hpf-MuT
GSM5288082 foxc1a-h-96hpf-WT
Relations
BioProject PRJNA728642
SRA SRP319166

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE174156_foxc1a_h_96hpf_EBSeq_results_all.xlsx 2.6 Mb (ftp)(http) XLSX
GSE174156_foxc1a_h_96hpf_FPKM.xlsx 1.9 Mb (ftp)(http) XLSX
GSE174156_foxc1a_h_96hpf_counts.xlsx 1.5 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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