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Series GSE174585 Query DataSets for GSE174585
Status Public on May 18, 2021
Title BRG1 role in neuronal activity
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 34260936
Submission date May 17, 2021
Last update date Aug 03, 2021
Contact name Zhenyu Xuan
E-mail(s) zhenyu.xuan@utdallas.edu
Phone 972-883-2518
Organization name UT Dallas
Street address 800 West Campbell
City Richardson
State/province TX
ZIP/Postal code 75080
Country USA
 
Platforms (4)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
GPL19057 Illumina NextSeq 500 (Mus musculus)
GPL21493 Illumina HiSeq 3000 (Mus musculus)
Samples (30)
GSM5320054 Neuron - Brg1 cKO, no KCl treatment - rep1
GSM5320055 Neuron - Brg1 cKO, KCl treated - rep1
GSM5320056 Neuron - Brg1 cKO, no KCl treatment - rep2
This SuperSeries is composed of the following SubSeries:
GSE174579 Open chromatin sites identified in wildtype and Brg1-cko neurons in basal and depolarized conditions [ATAC-seq]
GSE174581 Genome-wide maps of BRG1 binding sites in cortical neuron under basal and depolarized conditions [ChIP-seq]
GSE174583 BRG1 regulates neuronal activity-dependent gene activation [RNA-seq_A]
Relations
BioProject PRJNA730575

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE174585_RAW.tar 823.8 Mb (http)(custom) TAR (of BW, TSV, TXT)
SRA Run SelectorHelp

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