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Series GSE176138 Query DataSets for GSE176138
Status Public on Jun 05, 2021
Title A prenatal diagnosis case of partial duplication 21q21.1-q21.2 with normal phenotype maternally inherited
Organism Homo sapiens
Experiment type Genome variation profiling by SNP array
Summary Down syndrome is characterized by trisomy 21 or partial duplication of chromosome 21. There have been extensive studies focusing on the identification of the Down Syndrome Critical Region (DSCR). Our case aims in providing evidence that duplication of 21q21.1-q21.2 is not included in the DSCR and that it has no clinical consequences on the phenotype.
Due to missing the appropriate gestational age for serological screening, Non-Invasive Prenatal Testing (NIPT) analysis was performed for a pregnant woman with normal prenatal examinations at 22 weeks of gestation. The result of NIPT revealed a 5.8Mb maternally inherited duplication of 21q21.1-q21.2. To test whether the fetus also carried this duplication, ultrasound-guided amniocentesis was conducted and the result of chromosomal microarray analysis (CMA) with amniotic fluid showed a 6.7Mb duplication of 21q21.1-q21.2 (ranging from position 18,981,715 to 25,707,009) for the fetus. This partial duplication of 21q21.1-q21.2 for the fetus was maternally inherited. The pregnant woman and her family decided to continue the pregnancy after genetic counseling. This case clearly indicates that 21q21.1-q21.2 duplication is not included in the DSCR and most probably has no clinical consequences on the phenotype.
 
Overall design Non-Invasive Prenatal Testing (NIPT) analysis was performed for a pregnant woman with normal prenatal examinations at 22 weeks of gestation due to missing the appropriate gestational age for serological screening. The result of NIPT revealed a 5.8Mb maternally inherited duplication of 21q21.1-q21.2. To test whether the fetus also carried this duplication, ultrasound-guided amniocentesis was conducted and the result of chromosomal microarray analysis (CMA) with amniotic fluid showed a 6.7Mb duplication of 21q21.1-q21.2 (ranging from position 18,981,715 to 25,707,009) for the fetus.
 
Contributor(s) Jin C, Xu T
Citation(s) 34147104
Submission date Jun 04, 2021
Last update date Jul 02, 2021
Contact name Chunyan Jin
E-mail(s) gta5857@outlook.com
Organization name Taizhou People's Hospital
Street address 399 Hailin South Road
City Taizhou
State/province Jiangsu
ZIP/Postal code 225300
Country China
 
Platforms (1)
GPL18637 [CytoScan750K_Array] Affymetrix CytoScan 750K Array
Samples (2)
GSM5356863 Fetus
GSM5356864 Mother
Relations
BioProject PRJNA735093

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE176138_RAW.tar 193.8 Mb (http)(custom) TAR (of CEL, CYCHP)
Processed data provided as supplementary file

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