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Series GSE176430 Query DataSets for GSE176430
Status Public on Jun 09, 2021
Title Genomic alterations in Reinke's edema
Organism Homo sapiens
Experiment type Genome variation profiling by genome tiling array
Summary Reinke's edema (RE) is a laryngeal lesion related to excessive tobacco smoking, voice overuse, and laryngopharyngeal reflux. Although the risk of malignancy is low, RE has been classified among premalignant lesions. Array-based comparative genomic hybridization (aCGH) was used to investigate DNA copy number alterations (CNA) and as a tool to identify markers of risk stratification.
 
Overall design Genomic profiling of eight surgical specimens of RE was evaluated by aCGH (Agilent 4x180K platform). CNAs were compared with the Database of Genomic Variants (DGV) and genes mapped on altered regions with annotated functions.
 
Contributor(s) Móz LE, Villacis RA
Citation(s) 36243603
Submission date Jun 09, 2021
Last update date May 02, 2023
Contact name Rolando Andre Rios Villacis
E-mail(s) rolando.andre@unb.br
Phone +5561996912223
Organization name University of Brasília - UnB
Department Genetics and Morphology
Lab Genetic Toxicology
Street address Asa Norte
City Brasília
State/province DF
ZIP/Postal code 70910-900
Country Brazil
 
Platforms (1)
GPL10150 Agilent-022060 SurePrint G3 Human CGH Microarray 4x180K (Probe Name version)
Samples (8)
GSM5365369 Reinke´s edema sample 1
GSM5365370 Reinke´s edema sample 2
GSM5365371 Reinke´s edema sample 3
Relations
BioProject PRJNA736237

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE176430_RAW.tar 187.4 Mb (http)(custom) TAR (of TXT)
Processed data provided as supplementary file

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