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Status
Public on Mar 09, 2010
Title
Agilent-022060 SurePrint G3 Human CGH Microarray 4x180K (Probe Name version)
Technology type
in situ oligonucleotide
Distribution
commercial
Organism
Homo sapiens Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Description
SurePrint G3 Human CGH Microarray 4x180K
Submission date
Mar 09, 2010
Last update date
Oct 27, 2015
Organization
Agilent Technologies
E-mail(s)
cag_sales-na@agilent.com Phone
877-424-4536
URL
http://www.agilent.com Department
Street address
City
Palo Alto
State/province
CA
ZIP/Postal code
94304
Country
USA
Samples (1371)
GSM519519 , GSM519520 , GSM519521 , GSM519522 , GSM519523 , GSM519524
GSM525246 ,
GSM525247 ,
GSM525248 ,
GSM525249 ,
GSM525250 ,
GSM525251 ,
GSM525252 ,
GSM525253 ,
GSM525254 ,
GSM525255 ,
GSM525256 ,
GSM525257 ,
GSM525258 ,
GSM525259 ,
GSM525260 ,
GSM525261 ,
GSM525262 ,
GSM525263 ,
GSM525264 ,
GSM959961 ,
GSM959962 ,
GSM959963 ,
GSM959964 ,
GSM959965 ,
GSM959966 ,
GSM959967 ,
GSM959968 ,
GSM959969 ,
GSM959970 ,
GSM959971 ,
GSM959972 ,
GSM959973 ,
GSM959974 ,
GSM959975 ,
GSM959976 ,
GSM959977 ,
GSM959978 ,
GSM959979 ,
GSM959980 ,
GSM959981 ,
GSM959982 ,
GSM959983 ,
GSM959984 ,
GSM959985 ,
GSM959986 ,
GSM959987 ,
GSM959988 ,
GSM959989 ,
GSM959990 ,
GSM959991 ,
GSM959992 ,
GSM959993 ,
GSM959994 ,
GSM959995 ,
GSM959996 ,
GSM959997 ,
GSM959998 ,
GSM959999 ,
GSM960000 ,
GSM960001 ,
GSM960002 ,
GSM960003 ,
GSM960004 ,
GSM960005 ,
GSM960006 ,
GSM960007 ,
GSM960008 ,
GSM960009 ,
GSM960010 ,
GSM960011 ,
GSM960012 ,
GSM960013 ,
GSM960014 ,
GSM960015 ,
GSM960016 ,
GSM960017 ,
GSM960018 ,
GSM960019 ,
GSM960020 ,
GSM960021 ,
GSM960022 ,
GSM960023 ,
GSM960024 ,
GSM960025 ,
GSM960026 ,
GSM960027 ,
GSM960028 ,
GSM960029 ,
GSM960030 ,
GSM960031 ,
GSM960032 ,
GSM960033 ,
GSM960034 ,
GSM960035 ,
GSM960036 ,
GSM960037 ,
GSM960038 ,
GSM960039 ,
GSM960040 ,
GSM960041 ,
GSM960042 ,
GSM960043 ,
GSM960044 ,
GSM960045 ,
GSM960046 ,
GSM960047 ,
GSM960048 ,
GSM960049 ,
GSM960050 ,
GSM960051 ,
GSM960052 ,
GSM960053 ,
GSM960054 ,
GSM1149550 ,
GSM1149551 ,
GSM1149552 ,
GSM1149553 ,
GSM1149554 ,
GSM1149555 ,
GSM1149556 ,
GSM1149557 ,
GSM1149558 ,
GSM1149559 ,
GSM1149560 ,
GSM1149561 ,
GSM1149562 ,
GSM1149563 ,
GSM1149564 ,
GSM1149565 ,
GSM1149566 ,
GSM1149567 ,
GSM1149568 ,
GSM1149569 ,
GSM1149570 ,
GSM1149571 ,
GSM1149572 ,
GSM1149573 ,
GSM1149574 ,
GSM1149575 ,
GSM1149576 ,
GSM1149577 ,
GSM1149578 ,
GSM1149579 ,
GSM1149580 ,
GSM1149581 ,
GSM1149582 ,
GSM1149583 ,
GSM1149584 ,
GSM1149585 ,
GSM1149586 ,
GSM1149587 ,
GSM1149588 ,
GSM1149589 ,
GSM1149590 ,
GSM1149591 ,
GSM1149592 ,
GSM1149593 ,
GSM1149594 ,
GSM1149595 ,
GSM1149596 ,
GSM1149597 ,
GSM1149598 ,
GSM1149599 ,
GSM1149600 ,
GSM1149601 ,
GSM1149602 ,
GSM1149603 ,
GSM1149604 ,
GSM1149605 ,
GSM1149606 ,
GSM1149607 ,
GSM1149608 ,
GSM1149609 ,
GSM1149610 ,
GSM1149611 ,
GSM1149612 ,
GSM1149613 ,
GSM1149614 ,
GSM1149615 ,
GSM1149616 ,
GSM1149617 ,
GSM1149618 ,
GSM1149619 ,
GSM1149620 ,
GSM1149621 ,
GSM1149622 ,
GSM1149623 ,
GSM1149624 ,
GSM1149625 ,
GSM1149626 ,
GSM1149627 ,
GSM1149628 ,
GSM1149629 ,
GSM1149630 ,
GSM1149631 ,
GSM1149632 ,
GSM1149633 ,
GSM1149634 ,
GSM1149635 ,
GSM1149636 ,
GSM1149637 ,
GSM1149638 ,
GSM1149639 ,
GSM1149640 ,
GSM1149641 ,
GSM1149642 ,
GSM1149643 ,
GSM1149644 ,
GSM1149645 ,
GSM1149646 ,
GSM1149647 ,
GSM1149648 ,
GSM1149649 ,
GSM1149650 ,
GSM1149651 ,
GSM1149652 ,
GSM1149653 ,
GSM1149654 ,
GSM1149655 ,
GSM1149656 ,
GSM1149657 ,
GSM1149658 ,
GSM1149659 ,
GSM1149660 ,
GSM1149661 ,
GSM1149662 ,
GSM1149663 ,
GSM1149664 ,
GSM1149665 ,
GSM1149666 ,
GSM1149667 ,
GSM1149668 ,
GSM1149669 ,
GSM1149670 ,
GSM1149671 ,
GSM1149672 ,
GSM1149673 ,
GSM1149674 ,
GSM1149675 ,
GSM1149676 ,
GSM1149677 ,
GSM1149678 ,
GSM1149679 ,
GSM1149680 ,
GSM1149681 ,
GSM1149682 ,
GSM1149683 ,
GSM1149684 ,
GSM1149685 ,
GSM1149686 ,
GSM1149687 ,
GSM1149688 ,
GSM1149689 ,
GSM1149690 ,
GSM1149691 ,
GSM1149692 ,
GSM1149693 ,
GSM1149694 ,
GSM1149695 ,
GSM1149696 ,
GSM1149697 ,
GSM1149698 ,
GSM1149699 ,
GSM1149700 ,
GSM1149701 ,
GSM1149702 ,
GSM1149703 ,
GSM1149704 ,
GSM1149705 ,
GSM1149706 ,
GSM1149707 ,
GSM1149708 ,
GSM1149709 ,
GSM1149710 ,
GSM1149711 ,
GSM1149712 ,
GSM1149713 ,
GSM1149714 ,
GSM1149715 ,
GSM1149716 ,
GSM1149717 ,
GSM1149718 ,
GSM1149719 ,
GSM1149720 ,
GSM1149721 ,
GSM1149722 ,
GSM1149723 ,
GSM1149724 ,
GSM1149725 ,
GSM1149726 ,
GSM1149727 ,
GSM1149728 ,
GSM1149729 ,
GSM1149730 ,
GSM1149731 ,
GSM1149732 ,
GSM1149733 ,
GSM1149734 ,
GSM1149735 ,
GSM1149736 ,
GSM1149737 ,
GSM1149738 ,
GSM1149739 ,
GSM1149740 ,
GSM1149741 ,
GSM1149742 ,
GSM1149743 ,
GSM1149744 ,
GSM1149745 ,
GSM1149746 ,
GSM1149747 ,
GSM1149748 ,
GSM1149749 ,
GSM1149750 ,
GSM1149751 ,
GSM1149752 ,
GSM1149753 ,
GSM1149754 ,
GSM1149755 ,
GSM1149756 ,
GSM1149757 ,
GSM1149758 ,
GSM1149759 ,
GSM1149760 ,
GSM1149761 ,
GSM1149762 ,
GSM1149763 ,
GSM1149764 ,
GSM1149765 ,
GSM1149766 ,
GSM1149767 ,
GSM1149768 ,
GSM1149769 ,
GSM1149770 ,
GSM1149771 ,
GSM1149772 ,
GSM1149773 ,
GSM1149774 ,
GSM1264050 ,
GSM1264051 ,
GSM1264052 ,
GSM1264053 ,
GSM1264054 ,
GSM1264055 ,
GSM1264056 ,
GSM1264057 ,
GSM1264058 ,
GSM1264059 ,
GSM1264060 ,
GSM1264061 ,
GSM1264062 ,
GSM1264063 ,
GSM1264064 ,
GSM1264065 ,
GSM1264066 ,
GSM1264067 ,
GSM1264068 ,
GSM1264069 ,
GSM1264070 ,
GSM1264071 ,
GSM1264072 ,
GSM1264073 ,
GSM1264074 ,
GSM1264075 ,
GSM1264076 ,
GSM1264077 ,
GSM1264078 ,
GSM1264079 ,
GSM1264080 ,
GSM1264081 ,
GSM1264082 ,
GSM1264083 ,
GSM1264084 ,
GSM1264085 ,
GSM1264086 ,
GSM1264087 ,
GSM1264088 ,
GSM1264089 ,
GSM1264090 ,
GSM1264091 ,
GSM1264092 ,
GSM1264093 ,
GSM1264094 ,
GSM1264095 ,
GSM1264096 ,
GSM1264097 ,
GSM1264098 ,
GSM1264099 ,
GSM1264100 ,
GSM1264101 ,
GSM1264102 ,
GSM1264103 ,
GSM1264104 ,
GSM1264105 ,
GSM1264106 ,
GSM1264107 ,
GSM1264108 ,
GSM1264109 ,
GSM1264110 ,
GSM1264111 ,
GSM1264112 ,
GSM1264113 ,
GSM1264114 ,
GSM1264115 ,
GSM1264116 ,
GSM1264117 ,
GSM1264118 ,
GSM1264119 ,
GSM1264120 ,
GSM1264121 ,
GSM1264122 ,
GSM1264123 ,
GSM1264124 ,
GSM1264125 ,
GSM1264126 ,
GSM1264127 ,
GSM1264128 ,
GSM1264129 ,
GSM1264130 ,
GSM1264131 ,
GSM1264132 ,
GSM1264133 ,
GSM1313634 ,
GSM1402851 ,
GSM1402852 ,
GSM1402853 ,
GSM1402854 ,
GSM1402855 ,
GSM1402856 ,
GSM1402857 ,
GSM1402858 ,
GSM1402859 ,
GSM1402860 ,
GSM1402861 ,
GSM1402862 ,
GSM1402863 ,
GSM1402864 ,
GSM1402865 ,
GSM1402866 ,
GSM1402867 ,
GSM1402868 ,
GSM1402869 ,
GSM1402870 ,
GSM1402871 ,
GSM1402872 ,
GSM1402873 ,
GSM1402874 ,
GSM1402875 ,
GSM1402876 ,
GSM1402877 ,
GSM1402878 ,
GSM1402879 ,
GSM1402880 ,
GSM1402881 ,
GSM1402882 ,
GSM1402883 ,
GSM1402884 ,
GSM1402885 ,
GSM1402886 ,
GSM1402887 ,
GSM1402888 ,
GSM1402889 ,
GSM1402890 ,
GSM1402891 ,
GSM1402892 ,
GSM1402893 ,
GSM1402894 ,
GSM1402895 ,
GSM1402896 ,
GSM1402897 ,
GSM1402898 ,
GSM1402899 ,
GSM1402900 ,
GSM1402901 ,
GSM1402902 ,
GSM1440913 ,
GSM1440914 ,
GSM1440915 ,
GSM1440916 ,
GSM1440917 ,
GSM1440918 ,
GSM1440919 ,
GSM1440920 ,
GSM1440921 ,
GSM1440922 ,
GSM1440923 ,
GSM1440924 ,
GSM1440925 ,
GSM1440926 ,
GSM1440927 ,
GSM1440928 ,
GSM1440929 ,
GSM1440930 ,
GSM1536743 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here Series (30)
GSE20691 A Novel Dominant Mesomelic Dysplasia Associated with A 1.0-Mb Microduplication of HOXD Gene Cluster at 2q31.1
GSE21025 DNA copy number data from the CE01 clinical study
GSE39281 DNA copy number gain at 1q23.3 is associated with poor survival in metastatic bladder cancer [Agilent]
GSE39282 DNA copy number gain at 1q23.3 is associated with poor survival in metastatic bladder cancer
GSE47443 Somatic copy number alterations associating with alcohol drinking and smoking in head and neck squamous cell carcinoma
GSE52366 Reliable single cell array CGH for clinical samples
GSE54354 SMC2: a candidate gene associated with Cornelia de Lange Syndrome
GSE58192 Molecular profiling of single circulating tumor cells with diagnostic intention
GSE59631 Microarray correpsonding to the paper manuscript titled: Targeted expression profiling of single disseminated cancer cells isolated from bone marrow of prostate cancer patients
GSE62940 Characterization of genomic alterations in radiation-related breast cancer among childhood cancer survivors, using comparative genomic hybridization (CGH) arrays
GSE63035 Spatio-temporal evolution of the primary glioblastoma genome (aCGH)
GSE65720 Clonal relationship of relapsing diffuse large B-cell lymphoma
GSE66136 Genomic DNA damage in oral potentially malignant disorders (OPMDs) and oral squamous cell carcinomas (OSCCs). Early detection of DNA aneuploidy and chromosomal aberrations in non dysplastic OPMDs.
GSE71395 Clinical and prognostic relevance of squalene epoxidase in breast cancer
GSE72665 Rare CNVs in Lynch Syndrome patients negative for mutations in mismatch repair genes [Agilent]
GSE72668 Rare CNVs in Lynch Syndrome patients negative for mutations in mismatch repair genes
GSE73119 Single-cell transcriptome profiling for metastatic renal cell carcinoma patient-derived cells [aCGH]
GSE73122 Single-cell transcriptome profiling for metastatic renal cell carcinoma patient-derived cells
GSE86305 HER2 FISH results in breast cancers with increased CEN17 signals using alternative chromosome 17 probes - reclassifying cases in the equivocal category.
GSE89927 Genomic imbalances of lung cancer
GSE96624 ArrayCGH on a cohort of pediatric T-ALLs to investigate the mechanism of primary chemotherapy resistance
GSE109487 Characterizing the genetic background of nodal marginal zone lymphoma
GSE111393 Oncogenic drivers in 11q13 associated with prognosis in advanced oropharyngeal carcinomas (aCGH data set)
GSE111395 Oncogenic drivers in 11q13 associated with prognosis in advanced oropharyngeal carcinomas
GSE113015 Dynamics of genome alterations in Crohn’s disease associated colorectal carcinogenesis
GSE115080 Breast cancer metastasis to gynecological organs – a clinico-pathological and molecular profiling study.
GSE118478 Microfluidic enrichment, isolation and characterization of disseminated melanoma cells from lymph node samples
GSE119763 Exploring the spatiotemporal genetic heterogeneity in metastatic lung adenocarcinoma using a nuclei flow-sorting approach
GSE176430 Genomic alterations in Reinke's edema
GSE184692 aCGH of a pediatric acute lymphoblastic leukemia cohort
Relations Alternative to
GPL10123
Data table header descriptions ID Agilent Probe Name
CONTROL_TYPE Control type
GB_ACC GenBank Accession number
GENE_SYMBOL Gene Symbol
GENE_NAME Gene Name
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
CHROMOSOME chromosome
RANGE_GB RefSeq.version of chromosome (NBCI Build 36)
RANGE_START start position (relative to the RANGE_GB accession)
RANGE_END end position (relative to the RANGE_GB accession)
CYTOBAND Cytoband
DESCRIPTION Description
SPOT_ID Spot identifier
Data table ID CONTROL_TYPE GB_ACC GENE_SYMBOL GENE_NAME ACCESSION_STRING CHROMOSOMAL_LOCATION CHROMOSOME RANGE_GB RANGE_START RANGE_END CYTOBAND DESCRIPTION SPOT_ID (-)3xSLv1
neg
CONTROL
A_14_P100000
FALSE
NM_019027 RBM47
RNA binding motif protein 47
ref|NM_019027|ref|NM_001098634
chr4:40208083-40208142
chr4
NC_000004.10
40208083
40208142
hs|p14
Homo sapiens RNA binding motif protein 47 (RBM47), transcript variant 2, mRNA.
A_14_P100001
FALSE
NM_032888 COL27A1
collagen, type XXVII, alpha 1
ref|NM_032888
chr9:116020366-116020413
chr9
NC_000009.10
116020366
116020413
hs|q32
Homo sapiens collagen, type XXVII, alpha 1 (COL27A1), mRNA.
A_14_P100002
FALSE
chr18:14918795-14918854
chr18
NC_000018.8
14918795
14918854
hs|p11.21
A_14_P100003
FALSE
NM_001146261 SYT14
synaptotagmin XIV
ref|NM_001146261|ref|NM_001146262|ref|NM_001146264|ref|NR_027458|ref|NR_027459|ref|NM_153262
chr1:208179562-208179621
chr1
NC_000001.9
208179562
208179621
hs|q32.2
Homo sapiens synaptotagmin XIV (SYT14), transcript variant 1, mRNA.
A_14_P100005
FALSE
ens|ENST00000285670|ens|ENST00000389438
chr21:14876312-14876366
chr21
NC_000021.7
14876312
14876366
hs|q11.2
A_14_P100006
FALSE
chr7:54725577-54725636
chr7
NC_000007.12
54725577
54725636
hs|p11.2
A_14_P100007
FALSE
NM_012263 TTLL1
tubulin tyrosine ligase-like family, member 1
ref|NM_012263|ref|NR_027779
chr22:41767340-41767399
chr22
NC_000022.9
41767340
41767399
hs|q13.2
Homo sapiens tubulin tyrosine ligase-like family, member 1 (TTLL1), transcript variant 1, mRNA.
A_14_P100008
FALSE
NM_001134364 MAP4
microtubule-associated protein 4
ref|NM_001134364|ref|NM_002375|ref|NM_030885
chr3:48069785-48069844
chr3
NC_000003.10
48069785
48069844
hs|p21.31
Homo sapiens microtubule-associated protein 4 (MAP4), transcript variant 4, mRNA.
A_14_P100009
FALSE
NM_020344 SLC24A2
solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
ref|NM_020344
chr9:19636699-19636758
chr9
NC_000009.10
19636699
19636758
hs|p22.1
Homo sapiens solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 (SLC24A2), mRNA.
A_14_P100010
FALSE
NM_031471 FERMT3
fermitin family homolog 3 (Drosophila)
ref|NM_031471|ref|NM_178443
chr11:63746801-63746857
chr11
NC_000011.8
63746801
63746857
hs|q13.1
Homo sapiens fermitin family homolog 3 (Drosophila) (FERMT3), transcript variant URP2SF, mRNA.
A_14_P100011
FALSE
chr1:38603709-38603768
chr1
NC_000001.9
38603709
38603768
hs|p34.3
A_14_P100012
FALSE
NM_015576 ERC2
ELKS/RAB6-interacting/CAST family member 2
ref|NM_015576
chr3:56211013-56211072
chr3
NC_000003.10
56211013
56211072
hs|p14.3
Homo sapiens ELKS/RAB6-interacting/CAST family member 2 (ERC2), mRNA.
A_14_P100013
FALSE
ens|ENST00000296449
chr3:49117495-49117551
chr3
NC_000003.10
49117495
49117551
hs|p21.31
A_14_P100014
FALSE
NM_001098515 MRGPRF
MAS-related GPR, member F
ref|NM_001098515|ref|NM_145015
chr11:68528459-68528518
chr11
NC_000011.8
68528459
68528518
hs|q13.2
Homo sapiens MAS-related GPR, member F (MRGPRF), transcript variant 1, mRNA.
A_14_P100015
FALSE
NM_014012 REM1
RAS (RAD and GEM)-like GTP-binding 1
ref|NM_014012
chr20:29536104-29536161
chr20
NC_000020.9
29536104
29536161
hs|q11.21
Homo sapiens RAS (RAD and GEM)-like GTP-binding 1 (REM1), mRNA.
A_14_P100016
FALSE
NM_001135242 NDRG1
N-myc downstream regulated 1
ref|NM_001135242|ref|NM_006096
chr8:134367165-134367224
chr8
NC_000008.9
134367165
134367224
hs|q24.22
Homo sapiens N-myc downstream regulated 1 (NDRG1), transcript variant 1, mRNA.
A_14_P100017
FALSE
NM_000305 PON2
paraoxonase 2
ref|NM_000305|ref|NM_001018161
chr7:94901763-94901822
chr7
NC_000007.12
94901763
94901822
hs|q21.3
Homo sapiens paraoxonase 2 (PON2), transcript variant 1, mRNA.
A_14_P100018
FALSE
NM_003908 EIF2S2
eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa
ref|NM_003908
chr20:32159244-32159303
chr20
NC_000020.9
32159244
32159303
hs|q11.22
Homo sapiens eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa (EIF2S2), mRNA.
A_14_P100019
FALSE
chr13:85638560-85638619
chr13
NC_000013.9
85638560
85638619
hs|q31.1
173064 31482 Kbytes .Supplementary data files not provided
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