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| Status |
Public on Jan 01, 2010 |
| Title |
Ethanol stress response in Lactobacillus plantarum WCFS1 |
| Organism |
Lactiplantibacillus plantarum WCFS1 |
| Experiment type |
Expression profiling by array
|
| Summary |
Transcriptome profiles of control Lactobacillus plantarum WCFS1 cells were compared with 8% ethanol adapted cells and with 10 min or 30 min 8% ethanol shocked cells.
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| Overall design |
A continuous culture was performed in duplicate on medium containing ehtanol (tE). A shock experiment was performed in duplicate in which ethanol was added to a batch culture immediately after t0 (=control). The culture was sampled at time=0 (t0), time =10 min (t1) and time=30 min (t2).
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| Contributor(s) |
van de Veen H, Rojo-Bezares B, Bongers RS, Tempelaars M, Molenaar D, Marco M, Abee T, Kleerebezem M |
| Citation(s) |
21705551 |
| |
| Submission date |
Aug 27, 2009 |
| Last update date |
Mar 21, 2012 |
| Contact name |
Michiel Wels |
| E-mail(s) |
michiel.wels@nizo.com
|
| Organization name |
NIZO food research
|
| Street address |
Kernhemseweg 2
|
| City |
Ede |
| ZIP/Postal code |
6718 ZB |
| Country |
Netherlands |
| |
|
| Platforms (1) |
| GPL4318 |
WCFS Lactobacillus plantarum 11K 60-mer array, Version 1, our ID LPAG1 |
|
| Samples (12)
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| GSM445770 |
Control (no ethanol) vs. Shocked with 8% ethanol for 10 min hyb1 |
| GSM445771 |
Shocked with 8% ethanol for 30 min vs. Control (no ethanol) hyb2 |
| GSM445772 |
Shocked with 8% ethanol for 10 min vs. Shocked with 8% ethanol for 30 min hyb3 |
| GSM445773 |
Control (no ethanol) vs. 8% ethanol adapted for 24h hyb4 |
| GSM445774 |
8% ethanol adapted for 24h vs. 8% ethanol adapted for 24h hyb5 |
| GSM445775 |
8% ethanol adapted for 24h vs. Shocked with 8% ethanol for 30 min hyb6 |
| GSM445776 |
Control (no ethanol) vs. 8% ethanol adapted for 24h hyb7 |
| GSM445777 |
Shocked with 8% ethanol for 30 min vs. Control (no ethanol) hyb8 |
| GSM445778 |
Shocked with 8% ethanol for 30 min vs. Shocked with 8% ethanol for 30 min hyb9 |
| GSM445779 |
Shocked with 8% ethanol for 10 min vs. Shocked with 8% ethanol for 30 min hyb10 |
| GSM445780 |
Shocked with 8% ethanol for 30 min vs. Shocked with 8% ethanol for 10 min hyb11 |
| GSM445781 |
Shocked with 8% ethanol for 10 min vs. Shocked with 8% ethanol for 10 min hyb12 |
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| Relations |
| BioProject |
PRJNA117907 |
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