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Series GSE178701 Query DataSets for GSE178701
Status Public on Mar 05, 2022
Title Functional primordial germ cell-like cells from pluripotent stem cells in rats
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary In vitro generation of germ cells from pluripotent stem cells (PSCs) can crucially impact future reproductive medicine and animal breeding. A decade ago, in vitro gametogenesis was established in the mouse. However, induction of primordial germ cell-like cells (PGCLCs) to produce fertile gametes has not been achieved in any other species. Here, we demonstrate the induction of functional PGCLCs from rat PSCs. We show that epiblast-like cells in floating aggregates form rat PGCLCs. The gonadal somatic cells support maturation and epigenetic reprogramming of the PGCLCs. Notably, rat PGCLCs transplanted into the seminiferous tubules of germline-less rats produce spermatids, leading to the birth of viable offspring. Insights from our rat model will elucidate conserved and divergent mechanisms essential for the broad applicability of in vitro gametogenesis.
 
Overall design RNA-seq of rat embryonic stem cells (ESCs), epiblast-like cells (EpiLCs), and primordial germ cell like cells (PGCLCs).
 
Contributor(s) Kobayashi H, Oikawa M, Kobayashi T
Citation(s) 35389778
Submission date Jun 22, 2021
Last update date Apr 07, 2022
Contact name Hisato Kobayashi
E-mail(s) hiskobay@naramed-u.ac.jp
Phone +81-744-29-8015
Organization name Nara Medical University
Department Department of Embryology
Street address 840 Shijo-Cho
City Kashihara
State/province Nara
ZIP/Postal code 634-8521
Country Japan
 
Platforms (1)
GPL20084 Illumina NextSeq 500 (Rattus norvegicus)
Samples (8)
GSM5396275 ESC_rep1
GSM5396276 ESC_rep2
GSM5396277 EpiLC_rep1
Relations
BioProject PRJNA740032
SRA SRP325114

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE178701_Rat_Gene-Exp_ESC-EpiLC-PGCLC_log2_TPM+1.txt.gz 399.3 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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