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Series GSE179020 Query DataSets for GSE179020
Status Public on Jun 29, 2021
Title DRG-CSC co-culture tissue engineered model, CSCs monoculture model and DRG monoculture model
Organisms Gallus gallus; Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary In this study, we constructed a tissue-engineered DRG-CSC (corneal stromal cells) co-cultured model (DS model), a CSC monoculture model (S model), and a DRG monoculture model (D model). Chicken DRGs were extracted from E7-E10 chicken embryo. Human CSCs were extracted in stromal lenticules from small incision lenticule extraction (SMILE). Transcriptional profiling of DRG in the DS model (DS-D), DRG in the D model(D-D), CSCs in the DS model (DS-S), CSCs in the S model (S-S) was analyzed. After 7 days of culture, RNA of each group was extracted.
 
Overall design DS-D vs D-D, DS-S vs S-S. There are three biological replicates in each group.
 
Contributor(s) Cui Z, Chen J
Citation(s) 35562005
Submission date Jun 28, 2021
Last update date May 18, 2022
Contact name Zekai Cui
E-mail(s) cuizk7@gmail.com
Organization name Aier Eye Institute
Street address 18th floor, the New Century Building, #198, Furong Middle Road
City Changsha
State/province Hunan
ZIP/Postal code 410015
Country China
 
Platforms (2)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
GPL26853 Illumina NovaSeq 6000 (Gallus gallus)
Samples (12)
GSM5403771 DS-D1
GSM5403772 DS-D2
GSM5403773 DS-D3
Relations
BioProject PRJNA741931
SRA SRP325838

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE179020_DRG_count.txt.gz 209.4 Kb (ftp)(http) TXT
GSE179020_S_count.txt.gz 245.3 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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