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Series GSE180489 Query DataSets for GSE180489
Status Public on Mar 17, 2023
Title HypoSUMOylation in embryonic stem cells generates head-and-trunk embryo-like structure
Organism Mus musculus
Experiment type Methylation profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Contributor(s) Loe-Mie Y, Cossec J, Traboulsi T
Citation(s) 37061916
Submission date Jul 20, 2021
Last update date Apr 18, 2023
Contact name Yann Loe-Mie
E-mail(s) Yann.loe-mie@pasteur.fr
Organization name Institut Pasteur
Department Computational Biology
Lab Bioinformatics and Biostatistics HUB
Street address 25 rue du Dr Roux
City Paris
ZIP/Postal code 75015
Country France
 
Platforms (2)
GPL19057 Illumina NextSeq 500 (Mus musculus)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (289)
GSM5465744 mC-D1-rep1
GSM5465745 mC-D3-rep1
GSM5465746 mC-D8-rep1
This SuperSeries is composed of the following SubSeries:
GSE180597 HypoSUMOylation in embryonic stem cells generates head-and-trunk embryo-like structure [Methyl-seq]
GSE180676 HypoSUMOylation in embryonic stem cells generates head-and-trunk embryo-like structure [RNA-Seq]
GSE180679 HypoSUMOylation in embryonic stem cells generate head-trunk embryo-like structures [scRNAseq]
Relations
BioProject PRJNA749071

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE180489_RAW.tar 5.1 Gb (http)(custom) TAR (of BED, BW)
SRA Run SelectorHelp

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