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| Status |
Public on Aug 05, 2021 |
| Title |
The FimZ regulon of E. coli in the stationary phase |
| Platform organisms |
Escherichia coli O157:H7 str. EDL933; Escherichia coli CFT073; Escherichia coli O157:H7 str. Sakai; Escherichia coli str. K-12 substr. MG1655 |
| Sample organism |
Escherichia coli BW25113 |
| Experiment type |
Expression profiling by array
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| Summary |
To compare the transcriptional profiling of a FimZ-expressing strain or non-expressing strain in E. coli under stationary phase. For overexpression of fimZ gene was cloned into pBAD33 plasmid under control of the arabinose-inducible PBAD promoter, which was induced by addition of 0.2% arabinose. Goal was to determine the FimZ regulon in E. coli. Biological replicates: 2 replicates.
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| Overall design |
FimZ-expressing strain or non-expressing strain in E. coli under stationary phase
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| Contributor(s) |
Yamamoto K, Yamanaka Y |
| Citation missing |
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| |
| Submission date |
Aug 03, 2021 |
| Last update date |
Aug 07, 2021 |
| Contact name |
Kaneyoshi Yamamoto |
| E-mail(s) |
kanyamam@hosei.ac.jp
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| Organization name |
Hosei University
|
| Department |
Frontier Bioscience
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| Street address |
3-7-2 Kajinocho
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| City |
Koganei |
| State/province |
Tokyo |
| ZIP/Postal code |
1848584 |
| Country |
Japan |
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| Platforms (1) |
| GPL13359 |
Agilent-020097 E. coli Gene Expression Microarray (Probe Name version) |
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| Samples (2) |
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| Relations |
| BioProject |
PRJNA751892 |
