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Series GSE182397 Query DataSets for GSE182397
Status Public on Aug 15, 2023
Title Gene Editing of Anp32a Confers Resistance to Avian Influenza in Chicken
Organism Gallus gallus
Experiment type Expression profiling by high throughput sequencing
Summary Comparison of transcriptomic profiles of primordial germ cells and derived fibroblast cell lines from homozygous, CRISPR/Cas9 gene-edited, ANP32A knockout and mutant chickens
 
Overall design We used CRISPR/Cas9 to perform precise sequence changes in ANP32A to generate genome-edited PGC cell lines, which were also differentiated into fibroblast-like cell lines, all of which were subjected to RNA-seq in their native state.
 
Contributor(s) Skinner MA, Idoko-Akoh A, McGrew M
Citation(s) 37816720
Submission date Aug 18, 2021
Last update date Oct 25, 2023
Contact name Michael A Skinner
E-mail(s) m.skinner@imperial.ac.uk
Organization name Imperial College London
Department Faculty of Medicine, Section of Virology
Street address St Mary's Campus, Norfolk Place
City London
ZIP/Postal code W2 1PG
Country United Kingdom
 
Platforms (1)
GPL16133 Illumina HiSeq 2000 (Gallus gallus)
Samples (32)
GSM5528274 AK4M_AKO_Fb
GSM5528275 FR3F_AKO_12
GSM5528276 FR3F_AKO_14
Relations
BioProject PRJNA756092
SRA SRP333188

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE182397_RAW.tar 40.7 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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