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GEO help: Mouse over screen elements for information. |
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Status |
Public on Oct 04, 2012 |
Title |
Illumina HiSeq 2000 (Gallus gallus) |
Technology type |
high-throughput sequencing |
Distribution |
virtual |
Organism |
Gallus gallus |
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Submission date |
Oct 04, 2012 |
Last update date |
Feb 19, 2015 |
Contact name |
GEO |
Country |
USA |
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Samples (1411)
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GSM1015156, GSM1015157, GSM1015158, GSM1015159, GSM1015160, GSM1020747
GSM1020748, GSM1020749, GSM1020750, GSM1020751, GSM1020752, GSM1020753, GSM1020754, GSM1020755, GSM1020756, GSM1020757, GSM1020758, GSM1020759, GSM1020760, GSM1020761, GSM1020762, GSM1020763, GSM1020764, GSM1020765, GSM1020766, GSM1020767, GSM1020768, GSM1020769, GSM1020770, GSM1020771, GSM1020772, GSM1020773, GSM1030647, GSM1030648, GSM1030649, GSM1030650, GSM1030651, GSM1030652, GSM1049363, GSM1049364, GSM1049365, GSM1049366, GSM1054359, GSM1054360, GSM1054361, GSM1054362, GSM1054363, GSM1054364, GSM1054365, GSM1054366, GSM1054367, GSM1054368, GSM1054369, GSM1054370, GSM1054371, GSM1054372, GSM1054373, GSM1054374, GSM1054375, GSM1054376, GSM1054377, GSM1054378, GSM1054379, GSM1054380, GSM1054381, GSM1054382, GSM1058124, GSM1058125, GSM1058126, GSM1087285, GSM1087286, GSM1087287, GSM1096613, GSM1109164, GSM1109165, GSM1109166, GSM1109167, GSM1122509, GSM1122510, GSM1122511, GSM1194012, GSM1194013, GSM1194014, GSM1194015, GSM1194016, GSM1194017, GSM1194018, GSM1194019, GSM1194020, GSM1194021, GSM1194022, GSM1194023, GSM1194024, GSM1194025, GSM1194026, GSM1194027, GSM1196055, GSM1236402, GSM1236403, GSM1236404, GSM1236405, GSM1236406, GSM1236407, GSM1236408, GSM1236409, GSM1253764, GSM1253765, GSM1253766, GSM1253767, GSM1255515, GSM1255516, GSM1255517, GSM1255518, GSM1255519, GSM1255520, GSM1275640, GSM1275641, GSM1275642, GSM1275643, GSM1275644, GSM1275645, GSM1289969, GSM1289970, GSM1301480, GSM1370705, GSM1370706, GSM1370707, GSM1370708, GSM1370709, GSM1370710, GSM1375822, GSM1375823, GSM1375824, GSM1375825, GSM1375826, GSM1375827, GSM1375828, GSM1375829, GSM1375830, GSM1375831, GSM1375832, GSM1375833, GSM1375834, GSM1375835, GSM1375836, GSM1375837, GSM1375838, GSM1375839, GSM1375840, GSM1375841, GSM1375842, GSM1375843, GSM1375844, GSM1375845, GSM1375846, GSM1375847, GSM1375848, GSM1375849, GSM1397848, GSM1397849, GSM1397850, GSM1397851, GSM1397852, GSM1397853, GSM1397854, GSM1397855, GSM1397856, GSM1419093, GSM1419094, GSM1446034, GSM1446035, GSM1446036, GSM1446037, GSM1446038, GSM1446039, GSM1477978, GSM1477979, GSM1477980, GSM1477981, GSM1481260, GSM1481261, GSM1481262, GSM1481263, GSM1537537, GSM1537538, GSM1537539, GSM1537540, GSM1611717, GSM1611731, GSM1611732, GSM1611733, GSM1611734, GSM1611735, GSM1611736, GSM1611737, GSM1611738, GSM1611739, GSM1611740, GSM1611741, GSM1611742, GSM1611743, GSM1611744, GSM1611745, GSM1611746, GSM1611747, GSM1611748, GSM1611749, GSM1611750, GSM1611751, GSM1611752, GSM1611753, GSM1611754, GSM1611755, GSM1611756, GSM1611757, GSM1611758, GSM1611759, GSM1611760, GSM1611761, GSM1611762, GSM1614284, GSM1614285, GSM1614286, GSM1614287, GSM1614288, GSM1614289, GSM1614290, GSM1614291, GSM1614292, GSM1614293, GSM1614294, GSM1614295, GSM1614296, GSM1614297, GSM1614298, GSM1614299, GSM1614300, GSM1614301, GSM1614302, GSM1614303, GSM1614304, GSM1614305, GSM1614306, GSM1614307, GSM1614308, GSM1614309, GSM1614310, GSM1614311, GSM1644042, GSM1644043, GSM1644044, GSM1644045, GSM1644046, GSM1644047, GSM1644048, GSM1644049, GSM1644050, GSM1644051, GSM1644052, GSM1644053, GSM1644054, GSM1644055, GSM1644056, GSM1644057, GSM1644058, GSM1644059, GSM1644060, GSM1644061, GSM1644062, GSM1644063, GSM1644064, GSM1644065, GSM1645509, GSM1645510, GSM1645511, GSM1645512, GSM1645513, GSM1645514, GSM1672251, GSM1672252, GSM1678001, GSM1690103, GSM1690104, GSM1690105, GSM1690106, GSM1690107, GSM1690108, GSM1690109, GSM1690110, GSM1690111, GSM1690112, GSM1690113, GSM1690114, GSM1690115, GSM1690116, GSM1690117, GSM1690118, GSM1690119, GSM1690120, GSM1690121, GSM1690122, GSM1690123, GSM1690124, GSM1690125, GSM1690126, GSM1694986, GSM1694987, GSM1694988, GSM1694989, GSM1694990, GSM1717143, GSM1717144, GSM1717145, GSM1717146, GSM1717147, GSM1717148, GSM1717149, GSM1717150, GSM1724110, GSM1724111, GSM1724112, GSM1724113, GSM1724114, GSM1724115, GSM1724116, GSM1724117, GSM1724118, GSM1724119, GSM1724120, GSM1724121, GSM1724122, GSM1724123, GSM1724124, GSM1724125, GSM1724126, GSM1724127, GSM1724128, GSM1724129, GSM1724130, GSM1724131, GSM1858049, GSM1858050, GSM1862264, GSM1862265, GSM1862266, GSM1862267, GSM1893367, GSM1893368, GSM1893369, GSM1893370, GSM1893371, GSM1893372, GSM1893373, GSM1893374, GSM1893375, GSM1893376, GSM1893377, GSM1893378, GSM1893379, GSM1893380, GSM1893381, GSM1893382, GSM1893383, GSM1893384, GSM1893385, GSM1893386, GSM1893387, GSM1893388, GSM1893389, GSM1893390, GSM1893391, GSM1893392, GSM1893393, GSM1893394, GSM1893395, GSM1893396, GSM1893397, GSM1893398, GSM1893399, GSM1893400, GSM1893401, GSM1893402, GSM1893403, GSM1893404, GSM1893405, GSM1893406, GSM1893407, GSM1893408, GSM1893409, GSM1893410, GSM1893411, GSM1893412, GSM1893413, GSM1893414, GSM1893415, GSM1893416, GSM1893417, GSM1893418, GSM1893419, GSM1893420, GSM1893421, GSM1893422, GSM1893423, GSM1893424, GSM1893425, GSM1893426, GSM1893427, GSM1893428, GSM1893429, GSM1937087, GSM1937088, GSM1937089, GSM1937090, GSM1937091, GSM1943655, GSM1943656, GSM1943657, GSM1943658, GSM1956865, GSM1956866, GSM1956867, GSM1956868, GSM1956869, GSM1956870, GSM1956871, GSM1956872, GSM1956873, GSM1956874, GSM1956875, GSM1956876, GSM1956877, GSM1956878, GSM1956879, GSM1956880, GSM1956881, GSM1956882, GSM1956883, GSM1956884, GSM1956885, GSM1956886, GSM1956887, GSM1956888, GSM1956889, GSM1956890, GSM1956891, GSM1956892, GSM1956893, GSM1956894, GSM1956895, GSM1956896, GSM1956897, GSM1956898, GSM1956899, GSM1956900, GSM1956901, GSM1956902, GSM1956903, GSM1956904, GSM2028124, GSM2028125, GSM2028126, GSM2028127, GSM2028128, GSM2028129, GSM2035665, GSM2035666, GSM2035667, GSM2035668, GSM2045486, GSM2045490, GSM2045492, GSM2045495, GSM2045497, GSM2045499, GSM2045501, GSM2045504, GSM2129878, GSM2129879, GSM2227216, GSM2227217, GSM2227218, GSM2227219, GSM2227220, GSM2227221, GSM2264624, GSM2264625, GSM2264626, GSM2264627, GSM2264628, GSM2264629, GSM2264630, GSM2264631, GSM2264632, GSM2264633, GSM2264634, GSM2264635, GSM2264636, GSM2264637, GSM2264638, GSM2264639... Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here
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Series (122)
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GSE41338 |
The evolutionary landscape of alternative splicing in vertebrate species |
GSE41637 |
Evolutionary dynamics of gene and isoform regulation in mammalian tissues |
GSE42017 |
Gene expression in feather dermal papilla (DP) |
GSE42751 |
Comparison of the genome-wide DNA methylation profiles between fast-growing and slow-growing broilers |
GSE42980 |
RNA sequencing analysis of abdominal adipose tissue in 7 week old juvenile broiler chickens divergently selected for abdominal fatness or leanness |
GSE43194 |
Spatial Transcriptional Profile of the Chick and Mouse Endocardial Cushions Identify Novel Regulators of Endocardial EMT in vitro |
GSE43520 |
The evolution of lncRNA repertoires and expression patterns in tetrapods |
GSE44588 |
An Ancient Transcription Factor Initiates the Burst of piRNA Production During Early Meiosis in Mouse Testes (ChIP-Seq) |
GSE44690 |
An Ancient Transcription Factor Initiates the Burst of piRNA Production During Early Meiosis in Mouse Testes |
GSE45049 |
An Ancient Transcription Factor Initiates the Burst of piRNA Production During Early Meiosis in Mouse Testes (smallRNA-Seq) |
GSE45552 |
Genome-wide analysis of condensin binding sites in vertebrate genome |
GSE46046 |
Transcriptome analysis reveals an activation of MHC-I and MHC-II pathways in chicken trachea immunized with infectious laryngotracheitis virus vaccine |
GSE49121 |
RNA sequencing analysis of abdominal adipose tissue in 7 week old juvenile broiler chickens divergently selected for high or low body weight |
GSE51035 |
RNA-seq analysis of broiler liver transcriptome reveals novel responses to heat stress |
GSE51846 |
Clustering of CpG islands constitutes an important determinant of the interphase chromosome 3D organization [ChIP-Seq] |
GSE51937 |
Clustering of CpG islands constitutes an important determinant of the interphase chromosome 3D organization [4C-Seq] |
GSE51939 |
Clustering of CpG islands constitutes an important determinant of the interphase chromosome 3D organization |
GSE52757 |
RNA-seq of control and talpid2 facial prominences |
GSE53354 |
Transcriptome analysis of alternative splicing events regulated by SRSF10 reveals position-dependent splicing modulation. |
GSE53806 |
Analysis of the mRNA Targetome of MicroRNAs Expressed by Marek’s Disease Virus |
GSE56888 |
Expression data from proximal, middle, and distal segments of E6.5 chicken cochlea |
GSE57134 |
The Transcriptome of Utricle Hair Cell Regeneration in the Avian Inner Ear |
GSE57938 |
Differential expression of genes associated with prenatal protein under-nutrition by albumen removal in the chicken |
GSE58755 |
Global identification of growth-related long non-coding RNAs in breast muscle of chicken |
GSE59748 |
MicroRNA expression in chicken cecum following Salmonella Enteritidis infection |
GSE60400 |
Small non-coding RNA profiling and the role of piRNA pathway genes in the protection of chicken primordial germ cells |
GSE60497 |
Quantitative Analysis of differentially expressed genes between HH10-HH13 stages of chick embryo |
GSE62971 |
Deep Sequencing Analysis of miRNAs Expression in Breast Muscle of Fast-Growing and Slow-Growing Broilers |
GSE65959 |
Profiling of upstream enhancers of SHOX in idiopathic short stature and functional characterization of the cis-regulatory landscape of SHOX |
GSE65961 |
Histone modifications induced by MDV infection at early cytolytic and latency phases |
GSE66101 |
The Transcriptome of Basilar Papilla Hair Cell Regeneration in the Avian Inner Ear |
GSE67302 |
Avian pathogenic Escherichia coli (APEC) infection alters bone marrow transcriptome in chickens |
GSE67360 |
CELF1, and RNA binding protein, regulates transcript networks in cultured embryonic cardiomyocytes. |
GSE68460 |
Skin transcriptome profiles associated with skin color in chickens |
GSE68644 |
Extrachromosomal DNA (microDNA) in Human, Mouse and Chicken |
GSE69014 |
Thymus Transcriptome Reveals Novel Pathways in Response to Avian Pathogenic Escherichia coli (APEC) Infection |
GSE69015 |
Response to Avian Pathogenic Escherichia coli (APEC) Infection in diverse chicken tissues |
GSE69185 |
A systems level approach reveals new gene regulatory modules in the developing ear |
GSE70105 |
Functional analysis of chicken IRF7 in response to dsRNA analog poly(I:C) by integrating overexpression and knockdown |
GSE70334 |
Novel Pathways Revealed in Bursa of Fabricius Transcriptome in Response to Extraintestinal Pathogenic Escherichia coli (ExPEC) Infection |
GSE72222 |
MicroRNA signatures of Insulin-producing cells differentiated from mesenchymal stem cells |
GSE72424 |
A Genome-wide mRNA Screen and Functional Analysis Reveal FOXO3 as a Candidate Gene for Chicken Growth |
GSE73423 |
RNA sequencing-based analysis of the spleen transcriptome following infectious bronchitis virus infection of chickens selected for different mannose-binding lectin serum concentrations |
GSE74892 |
Condensin plays a role in both interphase nuclei and premature chromosome condensation |
GSE75125 |
Identification of cranial-specific neural crest genes by comparative transcriptomics |
GSE75480 |
Functional roles of Aves class specific cis-regulatory elements on macroevolution of bird-specific features |
GSE76573 |
Activation of the alpha-globin gene expression correlates with dramatic upregulation of nearby non-globin genes and changes of local and large-scale chromatin spatial structure |
GSE76677 |
The potential functions of FOXL2 in different phases of chicken granulosa cells by RNA-seq |
GSE77166 |
Genome Resequencing Identifies Unique Adaptations of Tibetan Chickens to Hypoxia and High-dose Ultraviolet Radiation in High-altitude Environments |
GSE80533 |
Genome-wide analysis of FOXO1 binding features in early stage of chicken myoblast differentiation |
GSE84099 |
High Concentrations of Atmospheric Ammonia Induce Alterations of Gene Expression in the Breast Muscle of Broilers (Gallus gallus) Based on RNA-Seq |
GSE85318 |
Population genome variations revealed by diversifying selection in chickens |
GSE85786 |
Transcriptome profile analysis of breast muscle tissues from high or low levels of atmospheric ammonia exposed broilers (Gallus gallus) |
GSE86251 |
Next Generation Sequencing Facilitates identification of genes differentially expressed during feather elongation |
GSE86413 |
Next Generation Sequencing Facilitates identification of crucial genes for feather vane shape variations |
GSE86415 |
Histone H3 Lysine 4 trimethylation (H3K4me3) ChIP-Seq and RNA-seq of narrower and wider vanes of primary remiges |
GSE86920 |
Lower Expression of SLC27A1 Enhances Intramuscular Fat Deposition in Chicken Via Down-Regulated Fatty Acid Oxidation Mediated by CPT1A |
GSE87139 |
Chicken embryonic feather and scale samples |
GSE87248 |
ChIP-seq for embryonic chicken feather and scale samples |
GSE87250 |
Multiple regulatory modules are required for scale-to-feather conversion |
GSE89040 |
Pervasive concerted evolution in gene expression shapes cell type transcriptomes |
GSE89544 |
RNA-seq analysis of hypertension induced by a high calcium intake in Chicken broiler kidney under varied calcium intake |
GSE93559 |
Domestic chickens activate a piRNA defense against avian leukosis virus |
GSE93855 |
Comparative transcriptomic analysis provides insights into high-altitude adaptation |
GSE95088 |
Chicken Hepatic Response to Chronic Heat Stress Using Integrated Transcriptome and Metabolome Analysis |
GSE98005 |
Oxidation treated small RNA-seq for studying roles of chicken piRNAs in germ cell development |
GSE98296 |
RNA-Seq Analysis of Spleen from Chicken and Japanese Quail infected with Lentogenic and Velogenic Newcastle Disease Virus |
GSE98629 |
Effects of Src on gallid alpha herpesvirus 1 intercellular spread |
GSE101413 |
Tracking transcriptional changes in a species-specific manner during experimental hepatoblastoma progression in vivo |
GSE102740 |
Mitotic chromosomes fold by condensin-dependent helical winding of chromatin loop arrays |
GSE102825 |
Epigenetic and transcriptomic signature reveals Sox8 as an otic master regulator |
GSE103206 |
RNA-seq analysis of miRNAs expression in chciken ALV-J-infected primary monocyte-derived macrophages (MDM) and uninfected control. |
GSE103207 |
RNA-seq analysis of mRNAs and lncRNAs expression in chciken ALV-J-infected primary monocyte-derived macrophages (MDM) and uninfected control. |
GSE104941 |
Identification of candidate genes associated with breast muscle of broilers exposed to atmospheric ammonia using RNA sequencing |
GSE106346 |
Neural induction by the node and placode induction by head mesoderm share an initial state resembling neural plate border |
GSE107498 |
Fate-restricted retinal progenitor cells adopt a molecular profile and spatial position distinct from multipotent progenitor cells |
GSE108348 |
Transcriptome variations across species, organs and developmental stages |
GSE109141 |
Identification and differential expression of microRNAs in the testis of chicken with high and low sperm motility |
GSE109223 |
Genome-wide maps of c-Myc binding sites in myoblasts and myotubes |
GSE110145 |
Genome-wide association study and transcriptome analysis provide new insights into the white/red earlobe color formation in chicken |
GSE111008 |
Chicken dermal papilla complex in dorsal growing feather |
GSE111099 |
RNA-Seq of chicken embryonic feather/scale recombination skin explants |
GSE111101 |
Transcriptome analyses of reprogrammed feather / scale chimeric explants revealed co-expressed epithelial gene networks during organ specification |
GSE112470 |
RNA-seq data of granulosa cells in chicken ovary |
GSE112894 |
RNA expression in the chick embryonic heart and sino-atrial node |
GSE118886 |
RNA-seq data of proximal and distal granulosa cells in chicken F1 and F5 ovarian follicles |
GSE119387 |
Environmental stress to Ethiopia indigenous chicken breeds induce immune signaling response among transcriptomic changes in heart, breast muscle and spleen tissues |
GSE120493 |
Subdivision of ancestral scale genetic program underlies origin of feathers and avian scutate scales |
GSE121507 |
Zinc oxide Nanoparticles exposure impairs cranial neural crest development by inducing oxidant stress during chicken embryogenesis |
GSE121526 |
Reconstruction of the global neural crest gene regulatory network in vivo [bulk RNA-seq] |
GSE121527 |
Reconstruction of the global neural crest gene regulatory network in vivo |
GSE122049 |
ChIP-seq for embryonic chicken feather samples |
GSE122224 |
Omics multi-layers networks and identification of the key genes and miRNAs involved in fat storage and metabolism: systems biology approach |
GSE122745 |
The Comparative Analysis of Phenotypic and Whole Transcriptome Gene Expression Data of Ascites Susceptible Versus Ascites Resistant Chickens |
GSE127203 |
RNA-sequencing reveals a distinct transcriptomic signature of chicken embryonic stem cells (cESC) infected with recombinant vaccine vectors |
GSE128028 |
Transcriptome profiles reveals potential core genes in the black skin of Xichuan Black-bone chickens(Gallus gallus) |
GSE130439 |
Single cell transcriptomes of developing chicken hind limbs at stages HH25, HH29 and HH31 |
GSE132299 |
Divergent Gene Expression through PI3K/Akt Signaling Pathway Cause Different Models of Hypertrophy Growth in Chicken |
GSE136329 |
Gene Expression Profiling in ovaries and association analysis reveal HEP21 as a candidate gene for chicken sexual maturity |
GSE139304 |
Developmental dynamics of miRNAs across chicken pectoral muscle and effect of gga-miRNA-454 on the differentiation of myoblasts |
GSE142263 |
Functional microRNA screening for dietary vitamin E regulation of abdominal fat deposition in broilers |
GSE143336 |
MeDIP-Seq for ALV-J-susceptible and ALV-J-resistant chickens |
GSE148014 |
Transcriptomic analyses of co-treatment of AFB1 and curcumin in chicken liver |
GSE155350 |
Coupled protein synthesis and ribosome-guided piRNA processing on mRNAs |
GSE157639 |
Effects of inteference with LSD1 on Spermatogenic stem cell transcriptome |
GSE162665 |
HoxB genes regulate neuronal delamination in the trunk neural tube by controlling the expression of Lzts1 |
GSE165330 |
Amniotes co-opt intrinsic genetic instability to protect germ-line genome integrity |
GSE166026 |
The severity of infectious bursal disease in White Leghorn inbred chicken lines is associated with greater bursal inflammation in vivo and more rapid induction of pro-inflammatory responses following ex vivo stimulation of primary bursal cells. |
GSE175780 |
Feeding Level Is Associated With Altered Liver Transcriptome and Follicle Selection in the Hen |
GSE178651 |
Regional specific differentiation of integumentary organs: SATB2 is involved in α- and β-keratin gene cluster switching in the chicken |
GSE181811 |
Somatic piRNAs in veterbrate kidney |
GSE182072 |
Sustained experimental activation of FGF8/ERK in the developing chicken spinal cord reproducibly models early events in ERK-mediated tumorigenesis |
GSE182076 |
HOXB8 counteracts MAPK/ERK oncogenic signaling in a chicken embryo model of neoplasia |
GSE182397 |
Gene Editing of Anp32a Confers Resistance to Avian Influenza in Chicken |
GSE186119 |
RNA-seq Analysis of the target genes of ALV-miR-p19-01 in DF-1 cells |
GSE188689 |
Prediction of sex-determination mechanisms in avian primordial germ cells using RNA-seq analysis |
GSE221147 |
ERR2 and ERR3 promote the development of gamma motor neuron functional properties required for proprioceptive movement control |
GSE232959 |
RNA sequencing of chicken limb distal mesenchyme to compare gene expression over time and in heterochronic grafted cells. |
GSE241418 |
Transcriptomic and Translatomic Analyses Reveal Insights into the Signaling Pathways of the Innate Immune Response in the Spleens of SPF Chickens Infected with Avian Reovirus |
GSE241777 |
Host transcriptome response to heat stress and Eimeria maxima infection in meat-type chickens |
GSE242250 |
Genome-wide epigenetic reprogramming during chick embryonic development |
GSE270914 |
Comprehensive transcriptome analysis of CIAV infected MDCC-MSB1 cells [] |
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Supplementary data files not provided |
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