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Status |
Public on Apr 30, 2023 |
Title |
Genome-wide binding of FOXD3 in mouse ESCs |
Organism |
Mus musculus |
Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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Summary |
We performed streptavidin pulldown sequencing of endogenously and exogenously Avi-tagged FOXD3 to determine genome-wide binding pattern of this transcription factor in asynchronous or cell cycle synchronized naive mouse ESCs.
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Overall design |
Endogenously Avi-tagged FOXD3 was compared to non-BirA expressing cells and exogeneously Avi-tagged FOXD3 was compared to non-induced cells.
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Contributor(s) |
Gökbuget D, Blelloch R |
Citation missing |
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Submission date |
Sep 03, 2021 |
Last update date |
May 02, 2023 |
Contact name |
Robert Blelloch |
Organization name |
UCSF
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Department |
Urology
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Street address |
35 Medical Center Way
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City |
San Francisco |
State/province |
CA |
ZIP/Postal code |
94143 |
Country |
USA |
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Platforms (2) |
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Samples (18)
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This SubSeries is part of SuperSeries: |
GSE183420 |
Transcriptional repressor FOXD3 safeguards genome integrity in embryonic stem cells |
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Relations |
BioProject |
PRJNA760537 |
SRA |
SRP335619 |