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Series GSE184374 Query DataSets for GSE184374
Status Public on May 12, 2022
Title Simultaneous Detection of DNA Adenine and Cytosine Methylation using NT-seq
Organisms Helicobacter pylori; Escherichia coli; Oxytricha trifallax; mixed culture metagenome
Experiment type Methylation profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 35637459
Submission date Sep 17, 2021
Last update date Jun 02, 2022
Contact name Tao P. Wu
E-mail(s) tao.wu@bcm.edu
Phone 713-798-2805
Organization name Baylor College of Medicine
Department Molecular and Human Genetics
Lab Tao Wu Lab
Street address One Baylor Plaza, MS BCM225
City Houston
State/province TX
ZIP/Postal code 77030
Country USA
 
Platforms (4)
GPL21222 Illumina NextSeq 500 (Escherichia coli)
GPL30644 Illumina NextSeq 500 (Helicobacter pylori)
GPL30645 Illumina NextSeq 500 (mixed culture metagenome)
Samples (22)
GSM5585240 HPJP26-rep1 - native
GSM5585241 HPJP26-rep1 - PCR
GSM5585242 Ecoli Input - native
This SuperSeries is composed of the following SubSeries:
GSE184372 Simultaneous Detection of DNA Adenine and Cytosine Methylation using NT-seq [series1: no enrichment]
GSE184373 Simultaneous Detection of DNA Adenine and Cytosine Methylation using NT-seq [series2: 6mA DIP enrichment]
Relations
BioProject PRJNA764231

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE184374_RAW.tar 1.7 Gb (http)(custom) TAR (of CSV, TXT)
SRA Run SelectorHelp

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