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Series GSE18508 Query DataSets for GSE18508
Status Public on Oct 09, 2009
Title modENCODE Drosophila RNA Binding Protein RNAi RNA-Seq Studies
Project modENCODE
Organism Drosophila melanogaster
Experiment type Expression profiling by high throughput sequencing
Summary Deep Sequencing of mRNA from the Drosophila melanogaster S2-DRSC cells that have been RNAi depleted of mRNAs encoding RNA binding proteins.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf
 
Overall design Analysis of Poly(A)+ RNA from S2-DRSC Cells depleted of mRNAs encoding RNA binding proteins
Web link http://www.ncbi.nlm.nih.gov/projects/geo/info/ENCODE.html
 
Contributor(s) Graveley BR, Yang L, Duff M, Brooks A, Hansen K, Brenner S, Duidot S, Landolin J, Wan K, Celniker S
Citation(s) 20921232, 26294686
BioProject PRJNA168994
Submission date Oct 09, 2009
Last update date Oct 29, 2019
Contact name Brenton R Graveley
E-mail(s) graveley@uchc.edu
Phone 860-679-2090
Organization name University of Connecticut Health Center
Department Genetics and Genome Sciences
Street address 400 Farmington Avenue
City Farmington
State/province CT
ZIP/Postal code 06030-3301
Country USA
 
Platforms (1)
GPL9061 Illumina Genome Analyzer II (Drosophila melanogaster)
Samples (121)
GSM461176 S2_DRSC_Untreated-1
GSM461177 S2_DRSC_Untreated-3
GSM461178 S2_DRSC_Untreated-4
Relations
SRA SRP001537

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE18508_RAW.tar 82.7 Gb (http)(custom) TAR (of BEDGRAPH, GFF, SAM)
SRA Run SelectorHelp
Processed data provided as supplementary file
Raw data are available in SRA

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