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Series GSE18510 Query DataSets for GSE18510
Status Public on Dec 20, 2009
Title miR-193b represses cell proliferation and regulates cyclin D1 in melanoma: Malme-3M
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Cutaneous melanoma is an increasingly common form of skin cancer. The molecular mechanisms regulating melanoma progression are not completely understood. We speculated that specific miRNAs may be involved in melanoma development. We compared the miRNA expression profiles of benign nevi and metastatic melanomas. Unsupervised hierarchical clustering demonstrated a distinct miRNA expression pattern in metastatic melanomas compared to nevi. We identified miRNAs that were differentially expressed in melanoma. Notably, miR-193b was significantly down-regulated in the melanoma tissue examined. Using functional studies we demonstrated that over-expression of miR-193b significantly reduced melanoma cell proliferation, and arrested cell at G1 phase. Further gene expression analysis revealed that miR-193b regulated targets involved in cell cycle. Cyclin D1 was down-regulated by miR-193b at both the mRNA and protein level. This is the first study to show that the miR-193b may reduce cell proliferation by directly repressing cyclin D1. Overall, our study suggests that miRNAs are dysregulated in metastatic melanoma, and that miR-193b may play an important role in melanoma.
 
Overall design Malme-3M cells were transfected with miRNA precursors (either miR-193b or negative control) for 24 h. Two independent experiments with a total of 4 samples.
 
Contributor(s) Chen J, Feilotter H, Zhang X, Tron VA
Citation(s) 20304954
Submission date Oct 09, 2009
Last update date Jan 23, 2019
Contact name Harriet Feilotter
Organization name Queen's University
Department Pathology and molecular department
Lab microarray facility
Street address 88 Stuart St
City Kingston
State/province Ontario
ZIP/Postal code K7L 3N6
Country Canada
 
Platforms (1)
GPL6480 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Probe Name version)
Samples (4)
GSM461234 Malme-3M miR193b I
GSM461235 Malme-3M neg ctrl I
GSM461236 Malme-3M miR193b II
This SubSeries is part of SuperSeries:
GSE18512 miR-193b represses cell proliferation and regulates cyclin D1 in melanoma
Relations
BioProject PRJNA123267

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE18510_RAW.tar 8.5 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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