|
| Status |
Public on Oct 14, 2009 |
| Title |
Zebrafish embryos: Control vs. 5-aza-2'-deoxycytidine treated |
| Organism |
Danio rerio |
| Experiment type |
Expression profiling by array
|
| Summary |
Transcriptional profiling of 24 hours post-fertilization zebrafish embryos comparing control untreated embryos with embryos raised in 75uM 5-azadC. 5-azadC blocks methylation. The goal was to determine genes regulated by methylation during development.
|
| |
|
| Overall design |
Two-condition experiment, 24 hour untreated embryos vs. 5azadC-treated embryos. Biological replicates: 3 control replicates, 3 5azadC-treated replicates.
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| |
|
| Contributor(s) |
Smith TH, McGowan RA |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Oct 11, 2009 |
| Last update date |
Apr 06, 2012 |
| Contact name |
Tamara Heather Lorraine Smith |
| E-mail(s) |
t33thls@mun.ca
|
| Phone |
709-737-8536
|
| Organization name |
Memorial University
|
| Department |
Biochemistry
|
| Lab |
Dr. McGowan
|
| Street address |
Memorial University of Newfoundland
|
| City |
St. John's |
| ZIP/Postal code |
A1B 3X9 |
| Country |
Canada |
| |
|
| Platforms (1) |
| GPL7302 |
Agilent-015064 D. rerio (Zebrafish) Oligo Microarray 4x44K G2519F (Probe Name version) |
|
| Samples (3) |
| GSM461401 |
24 hour Zf embyos_5azadC treated vs. control_Replicate 1 |
| GSM461402 |
24 hour Zf embyos_5azadC treated vs. control_Replicate 2 |
| GSM461403 |
24 hour Zf embyos_5azadC treated vs. control_Replicate 3 |
|
| Relations |
| BioProject |
PRJNA120195 |
