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Series GSE189327 Query DataSets for GSE189327
Status Public on Nov 03, 2022
Title mTORC1 signaling facilitates differential stem cell differentiation to shape the developing murine lung and is associated with mitochondrial capacity
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Formation of branched organs requires sequential differentiation of stem cells. In this work, we find that the conducting airways derived from SOX2+ progenitors in the murine lungs fail to form without mTOR complex 1 (mTORC1) signaling and are replaced by lung cysts. Proximal-distal patterning through transitioning of distal SOX9+ progenitors to the proximal SOX2+ cells is disrupted. Mitochondria number and ATP production are reduced. Compromised mitochondrial capacity results in a similar defect as that in mTORC1-deficient lungs. This suggests that mTORC1 promotes differentiation of SOX9+ progenitors to form the conducting airways by modulating mitochondrial capacity. Surprisingly, in all mutants saccules are produced from lung cysts at the proper developmental time despite defective branching. SOX9+ progenitors also differentiate into alveolar epithelial type I and type II cells within saccules. These findings highlight selective utilization of energy and regulatory programs during stem cell differentiation to produce distinct structures of the mammalian lungs.
 
Overall design Examination the gene expression difference between Control and mTORC1 deficient lungs
 
Contributor(s) Zhang K, Yao E, Chuang E, Chen B, Chuang EY, Chuang P
Citation(s) 36433959
Submission date Nov 22, 2021
Last update date Dec 15, 2022
Contact name Pao-Tien Chuang
Organization name University of California, San Francisco
Street address 555 Mission Bay Blvd. South
City San Francisco
ZIP/Postal code CA 94158-3118
Country USA
 
Platforms (1)
GPL23479 BGISEQ-500 (Mus musculus)
Samples (6)
GSM5699235 Raptor-ShhCre Control rep1
GSM5699236 Raptor-ShhCre Control rep2
GSM5699237 Raptor-ShhCre Control rep3
Relations
BioProject PRJNA782556

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Supplementary file Size Download File type/resource
GSE189327_Raptor-ShhCre_at_E11.5dpc.csv.gz 1.1 Mb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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