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Series GSE19003 Query DataSets for GSE19003
Status Public on Apr 09, 2012
Title Seeking novel mammalian genes using transcript profiling and genotyping of a human radiation hybrid panel
Platform organism Homo sapiens
Sample organisms Homo sapiens; Cricetulus griseus
Experiment type Expression profiling by array
Genome variation profiling by array
Summary Using a human-hamster radiation hybrid panel (G3), we have mapped loci regulating gene expression due to copy number increase.
Overall design Copy number from radiation hybrid clones were measured relative to the A23 hamster recipient line.
Expression from 79 radiation hybrid clones were measured in duplicate and compared to expression of the A23 hamster recipient line (GA_illumina_expression1 and GA_illumina_expression2). Expression of liver, kidney and heart from human and hamster are also included (GA_illumina_expression_R).
Contributor(s) Wang R
Citation(s) 22085887
Submission date Nov 12, 2009
Last update date Nov 14, 2014
Contact name Richard T Wang
Organization name UCLA
Street address 650 Charles E Young Drive South
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
Platforms (2)
GPL2700 Sentrix HumanRef-8 Expression BeadChip
GPL9128 Agilent-014693 Human Genome CGH Microarray 244A (Probe name version)
Samples (269)
GSM470069 RH server number 1
GSM470070 RH server number 2
GSM470071 RH server number 3
BioProject PRJNA120437

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE19003_GA_illumina_expression1_non-normalized.txt.gz 8.7 Mb (ftp)(http) TXT
GSE19003_GA_illumina_expression2_non-normalized.txt.gz 8.8 Mb (ftp)(http) TXT
GSE19003_GA_illumina_expression_R_non-normalized.txt.gz 1.6 Mb (ftp)(http) TXT
GSE19003_RAW.tar 5.4 Gb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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