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GEO accession:
Series GSE191204
Query DataSets for GSE191204
Status
Public on Apr 19, 2023
Title
Single-cell RNA-sequencing reveals an intratumor heterogeneity in pancreatic adenocarcinoma
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
37096681
Submission date
Dec 18, 2021
Last update date
May 01, 2023
Contact name
Masaya Yamazaki
E-mail(s)
myamazaki@kumamoto-u.ac.jp
Organization name
Kumamoto university
Lab
Medical Biochemistry
Street address
1-1-1, Honjyo, Chuo-ku
City
Kumamoto city
ZIP/Postal code
860-8556
Country
Japan
Platforms (3)
GPL18573
Illumina NextSeq 500 (Homo sapiens)
GPL20795
HiSeq X Ten (Homo sapiens)
GPL24676
Illumina NovaSeq 6000 (Homo sapiens)
Samples (32)
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GSM5741306
S2-VP10_xenograft_Chromium
GSM5741408
S2-VP10_xenograft_ROR1high-1
GSM5741409
S2-VP10_xenograft_ROR1low-1
GSM5741410
S2-VP10_xenograft_ROR1high-2
GSM5741411
S2-VP10_xenograft_ROR1low-2
GSM5741412
S2-VP10_xenograft_ROR1high-3
GSM5741413
S2-VP10_xenograft_ROR1low-3
GSM5741574
S2-VP10_CUT&RUN_IgG
GSM5741575
S2-VP10_CUT&RUN_H3K4me1
GSM5741576
S2-VP10_CUT&RUN_H3K4me3
GSM5741577
S2-VP10_CUT&RUN_H3K27ac
GSM5741578
S2-VP10_xenograft_ROR1high_CUT&RUN_IgG
GSM5741579
S2-VP10_xenograft_ROR1high_CUT&RUN_H3K4me1
GSM5741580
S2-VP10_xenograft_ROR1high_CUT&RUN_H3K27ac
GSM5741581
S2-VP10_xenograft_ROR1low_CUT&RUN_IgG
GSM5741582
S2-VP10_xenograft_ROR1low_CUT&RUN_H3K4me1
GSM5741583
S2-VP10_xenograft_ROR1low_CUT&RUN_H3K27ac
GSM5741584
S2-VP10_ATAC
GSM5741585
S2-VP10_xenograft_ROR1high_ATAC
GSM5741586
S2-VP10_xenograft_ROR1low_ATAC
GSM5795936
PDO#1_xenograft_ROR1high-1
GSM5795937
PDO#1_xenograft_ROR1low-1
GSM5795938
PDO#1_xenograft_ROR1high-2
GSM5795939
PDO#1_xenograft_ROR1low-2
GSM5795940
PDO#1_xenograft_ROR1high-3
GSM5795941
PDO#1_xenograft_ROR1low-3
GSM6355820
PANC-1 siCtrl-1
GSM6355821
PANC-1 siCtrl-2
GSM6355822
PANC-1 siCtrl-3
GSM6355823
PANC-1 siROR1-1
GSM6355824
PANC-1 siROR1-2
GSM6355825
PANC-1 siROR1-3
This SuperSeries is composed of the following SubSeries:
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GSE191193
Single-cell RNA-sequencing reveals an intratumor heterogeneity in pancreatic adenocarcinoma [scRNA-seq]
GSE191198
Single-cell RNA-sequencing reveals an intratumor heterogeneity in pancreatic adenocarcinoma [RNA-seq]
GSE191202
Single-cell RNA-sequencing reveals an intratumor heterogeneity in pancreatic adenocarcinoma [CUT&RUN]
GSE191203
Single-cell RNA-sequencing reveals an intratumor heterogeneity in pancreatic adenocarcinoma [ATAC-seq]
Relations
BioProject
PRJNA790442
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
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Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE191204_RAW.tar
902.1 Mb
(http)
(custom)
TAR (of BED, BIGWIG, TAR)
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