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Series GSE198293 Query DataSets for GSE198293
Status Public on May 31, 2022
Title Genome-wide H3K27me3 profile in in vitro produced bovine morula treated with MAT2A inhibitor
Organism Bos taurus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We obtained genome-wide profiles of histone H3 lysine 27 trimethylation (H3K27me3) in bovine morula which had been in vitro treated with a methionine adenosyltransferase 2A (MAT2A) inhibitor from the 8-16 cell stage. Sequencing center: NODAI Genome Research Center, Tokyo University of Agriculture
 
Overall design In vitro produced bovine morulae were processed to ChIP-Seq using H3K27me3 antibody. The experiments were duplicated using two biological replicates.
 
Contributor(s) Ota A, Ikeda S, Shinozawa A, Iwata H, Sugimoto M, Minami N, Ohta T
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Mar 10, 2022
Last update date Jun 02, 2022
Contact name Shuntaro Ikeda
Organization name Kyoto University
Department Graduate School of Agriculture
Street address Kitashirakawa Oiwake-cho, Sakyo-ku
City Kyoto
ZIP/Postal code 6068502
Country Japan
 
Platforms (1)
GPL23055 Illumina NextSeq 500 (Bos taurus)
Samples (4)
GSM5944394 Control_rep1
GSM5944395 MAT2A-inhibited_rep1
GSM5944396 Control_rep2
This SubSeries is part of SuperSeries:
GSE198295 Profile in in vitro produced bovine morulae treated with MAT2A inhibitor
Relations
BioProject PRJNA814513

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE198293_RAW.tar 2.1 Gb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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