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| Status |
Public on Feb 10, 2017 |
| Title |
Illumina NextSeq 500 (Bos taurus) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organism |
Bos taurus |
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| Submission date |
Feb 10, 2017 |
| Last update date |
Feb 10, 2017 |
| Contact name |
GEO |
| Country |
USA |
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| Samples (1698)
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GSM2482735, GSM2482736, GSM2482737, GSM2482738, GSM2482739, GSM2482740
GSM2525955, GSM2525956, GSM2525957, GSM2525958, GSM2525959, GSM2525960, GSM2825934, GSM2825935, GSM2825936, GSM2825937, GSM2825938, GSM2825939, GSM2882879, GSM2882880, GSM2882881, GSM2882882, GSM2882883, GSM2882884, GSM2882885, GSM2882886, GSM2882887, GSM2882888, GSM2882889, GSM2882890, GSM2882891, GSM2882892, GSM2882893, GSM2882894, GSM2882895, GSM2882896, GSM2882897, GSM2882898, GSM2882899, GSM2882900, GSM2882901, GSM2882902, GSM2882903, GSM2882904, GSM2882905, GSM2882906, GSM2882907, GSM2882908, GSM2882909, GSM2882910, GSM2882911, GSM2882912, GSM2882913, GSM2882914, GSM2882915, GSM2882916, GSM2882917, GSM2882918, GSM2882919, GSM2882920, GSM2882921, GSM2882922, GSM2882923, GSM2882924, GSM2882925, GSM2882926, GSM2882927, GSM2882928, GSM2882929, GSM2882930, GSM2891455, GSM2891456, GSM2891457, GSM2891458, GSM2891459, GSM2891460, GSM2891461, GSM2891462, GSM2891463, GSM2891464, GSM2891465, GSM2891466, GSM2891467, GSM2891468, GSM2891469, GSM2891470, GSM2891471, GSM2891472, GSM2891473, GSM2891474, GSM2891475, GSM2891476, GSM2891477, GSM2891478, GSM2891479, GSM2891480, GSM2891481, GSM2891482, GSM2891483, GSM2891484, GSM2891485, GSM2891486, GSM2891487, GSM2891488, GSM2891489, GSM2891490, GSM2891491, GSM2891492, GSM2891493, GSM2891494, GSM2891495, GSM2891496, GSM2891497, GSM2891498, GSM2891499, GSM2891500, GSM2891501, GSM2891502, GSM2891503, GSM2891504, GSM2914187, GSM2914188, GSM2914189, GSM2914190, GSM2914191, GSM2914192, GSM2914193, GSM2914194, GSM2914195, GSM2914196, GSM2914197, GSM2914198, GSM2914199, GSM2914200, GSM2914201, GSM2914202, GSM2914203, GSM2914204, GSM2914205, GSM2914206, GSM2914207, GSM2914208, GSM2914209, GSM2914210, GSM2914211, GSM2914212, GSM2914213, GSM2914214, GSM2914215, GSM2914216, GSM2914217, GSM2914218, GSM2914219, GSM2914220, GSM2914221, GSM2914222, GSM2914223, GSM2914224, GSM2914225, GSM2914226, GSM2914227, GSM2914228, GSM2914229, GSM2914230, GSM2914231, GSM2914232, GSM2914233, GSM2914234, GSM2914235, GSM2914236, GSM2914237, GSM2914238, GSM2914239, GSM2914240, GSM2914241, GSM2914242, GSM2914243, GSM2914244, GSM2914245, GSM2914246, GSM3318672, GSM3318673, GSM3318674, GSM3318675, GSM3318676, GSM3318677, GSM3318678, GSM3318679, GSM3318680, GSM3318681, GSM3318682, GSM3318683, GSM3331243, GSM3331244, GSM3331245, GSM3331246, GSM3331247, GSM3331248, GSM3331249, GSM3331250, GSM3331251, GSM3331252, GSM3331253, GSM3331254, GSM3331255, GSM3331256, GSM3331257, GSM3331258, GSM3331259, GSM3331260, GSM3331261, GSM3331262, GSM3331263, GSM3331264, GSM3331265, GSM3331266, GSM3331267, GSM3331268, GSM3331269, GSM3331270, GSM3331271, GSM3331272, GSM3331273, GSM3331274, GSM3331275, GSM3331276, GSM3331277, GSM3331278, GSM3331279, GSM3331280, GSM3331281, GSM3331282, GSM3336430, GSM3336431, GSM3336432, GSM3336433, GSM3336434, GSM3336435, GSM3336436, GSM3336437, GSM3336438, GSM3336439, GSM3336440, GSM3336441, GSM3336442, GSM3336443, GSM3336444, GSM3336445, GSM3336446, GSM3336447, GSM3336448, GSM3336449, GSM3336450, GSM3336451, GSM3336452, GSM3405409, GSM3405410, GSM3405411, GSM3405412, GSM3405413, GSM3405414, GSM3405415, GSM3405416, GSM3562363, GSM3562364, GSM3562365, GSM3562366, GSM3562367, GSM3562368, GSM3562369, GSM3562370, GSM3562371, GSM3562372, GSM3562373, GSM3562374, GSM3562375, GSM3562376, GSM3562377, GSM3562378, GSM3562379, GSM3562380, GSM3562381, GSM3562382, GSM3562383, GSM3562384, GSM3562385, GSM3562386, GSM3562387, GSM3562388, GSM3562389, GSM3562390, GSM3711890, GSM3711891, GSM3711892, GSM3711893, GSM3711894, GSM3711895, GSM3711896, GSM3711897, GSM3711898, GSM3711899, GSM3711900, GSM3711901, GSM3711902, GSM3712682, GSM3712683, GSM3712684, GSM3712685, GSM3712686, GSM3712687, GSM3712688, GSM3712689, GSM3712690, GSM3712691, GSM3712692, GSM3712693, GSM3712694, GSM3712695, GSM3712696, GSM3756986, GSM3756987, GSM3756988, GSM3756989, GSM3756990, GSM3756991, GSM3756992, GSM3756993, GSM3756994, GSM3756995, GSM3756996, GSM3756997, GSM3756998, GSM3756999, GSM3757000, GSM3757001, GSM3757002, GSM3757003, GSM3757004, GSM3757005, GSM3757006, GSM3757007, GSM3757008, GSM3757009, GSM3757010, GSM3757011, GSM3757012, GSM3757013, GSM3757014, GSM3757015, GSM3757016, GSM3757017, GSM3757018, GSM3757019, GSM3757020, GSM3757021, GSM3757022, GSM3757023, GSM3757024, GSM3757025, GSM3757026, GSM3757027, GSM3757028, GSM3757029, GSM3757030, GSM3765232, GSM3765233, GSM3765234, GSM3765235, GSM3765236, GSM3765237, GSM3765238, GSM3765239, GSM3765240, GSM3765241, GSM3765242, GSM3765243, GSM3765244, GSM3765245, GSM3765246, GSM3765247, GSM3765248, GSM3765249, GSM3780800, GSM3780801, GSM3780802, GSM3780803, GSM3780804, GSM3780805, GSM3780806, GSM3780807, GSM3780808, GSM3780809, GSM3780810, GSM3780811, GSM3780812, GSM3780813, GSM3780814, GSM3780815, GSM3780816, GSM3780817, GSM3851726, GSM3851727, GSM3851728, GSM3851729, GSM3861277, GSM3861278, GSM3861279, GSM3861280, GSM3861281, GSM3861282, GSM3861283, GSM3861284, GSM3990112, GSM3990113, GSM3990114, GSM3990115, GSM3990116, GSM3990117, GSM3990118, GSM3990119, GSM3990120, GSM3990121, GSM3990122, GSM3990123, GSM3990124, GSM3990125, GSM3990126, GSM4054570, GSM4054571, GSM4054572, GSM4054573, GSM4054574, GSM4054575, GSM4054576, GSM4054577, GSM4058223, GSM4058224, GSM4058225, GSM4058226, GSM4058227, GSM4058228, GSM4058229, GSM4058230, GSM4058231, GSM4058232, GSM4058233, GSM4058234, GSM4058235, GSM4058236, GSM4058237, GSM4058238, GSM4058239, GSM4058240, GSM4058241, GSM4058242, GSM4058243, GSM4058244, GSM4058245, GSM4058246, GSM4058247, GSM4058248, GSM4058249, GSM4058250, GSM4058251, GSM4058252, GSM4058253, GSM4058254, GSM4058255, GSM4058256, GSM4058257, GSM4058258, GSM4058259, GSM4058260, GSM4058261, GSM4058262, GSM4058263, GSM4058264, GSM4058265, GSM4058266, GSM4058267, GSM4058268, GSM4058269, GSM4058270, GSM4058271, GSM4058272, GSM4058273, GSM4058274, GSM4058275, GSM4058276, GSM4058277, GSM4058278, GSM4058279, GSM4058280, GSM4058281, GSM4058282, GSM4058283, GSM4058284, GSM4058285, GSM4058286, GSM4058287...
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| Series (77)
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| GSE94771 |
microRNA expression in bovine cumulus cells and its relation to oocyte developmental competence |
| GSE95789 |
Comparison of transcriptome profiles between bulls and steers in the longissimus dorsi muscle of Korean cattle |
| GSE103734 |
Genome-wide histone modification profiling of inner cell mass and trophoectoderm of blastocyst stage bovine embryos by novel low input RAT-ChIP |
| GSE107891 |
Uterine Influences on Conceptus Development in Fertility-Classified Animals |
| GSE108163 |
Uterine microbiome in postpartum dairy cows: Associations with ovarian cyclicity and endometrial transcriptome at five and nine weeks after calving |
| GSE108840 |
Deciphering the mammary gland transcriptome during the dry period in dairy cows under heat stress |
| GSE118108 |
Gene expression profiling of PBMCs in dairy cows pre- and post-partum |
| GSE118507 |
Do differences in the endometrial transcriptome between uterine horns ipsilateral and contralateral to the corpus luteum influence conceptus growth to Day 14 in cattle? |
| GSE118672 |
Interferon tau-dependent and independent effects of the bovine conceptus on the endometrial transcriptome: effect of conceptus origin and sex |
| GSE120594 |
Questioning the purity of the media - Extracellular small non-coding RNA contaminants in fetal bovine serum and serum-free media |
| GSE125082 |
Enhanced early-life nutrition upregulates cholesterol biosynthetic gene expression and Sertoli cell maturation in testes of pre-pubertal Holstein bulls |
| GSE129367 |
Differential expression profiles of extracellular vesicle-coupled miRNA in follicular fluid of cows at different metabolic status |
| GSE129418 |
Systematic Discovery and Characterization of Chromatin States and Butyrate-induced Variations for Cattle Genome Functional Annotation [dataset 3] |
| GSE129419 |
Systematic Discovery and Characterization of Chromatin States and Butyrate-induced Variations for Cattle Genome Functional Annotation [dataset 4] |
| GSE129423 |
Systematic Discovery and Characterization of Chromatin States and Butyrate-induced Variations for Cattle Genome Functional Annotation |
| GSE130954 |
Molecular fingerprint of in vitro produced bovine embryos with high competence to establish pregnancy |
| GSE131178 |
Molecular fingerprint of bovine embryos produced by superovulation with high competence to establish pregnancy |
| GSE131452 |
Elucidation of the host transcriptomic response to bovine respiratory syncytial virus |
| GSE132158 |
PIWIL3 forms a complex with TDRKH in mammalian oocytes |
| GSE132379 |
Creb5 establishes the competence for Prg4 expression in articular cartilage |
| GSE135162 |
RNAseq bovine subcutaneous adipose tissue in periparturient stage |
| GSE136652 |
Transcriptional profiling reveals differential response to heat stress in Tharparker and Crossbred Cattle |
| GSE136800 |
Novel insights into retinal microvascular endothelial cells revealed through single cell RNA-seq analysis. |
| GSE137395 |
RNA-Seq analysis of ileocecal valve and peripheral blood from Holstein cattle infected with Mycobacterium avium subsp. paratuberculosis |
| GSE137690 |
Enhanced pre-pubertal nutrition upregulates mitochondrial function in the testes and sperm of post-pubertal Holstein bulls |
| GSE138793 |
CD14+ Bovine Milk Macrophage Challenge with Streptococcus uberis |
| GSE139867 |
Transcriptome changes in bovine oocytes caused by microinjection |
| GSE142472 |
Integration of whole-genome DNA methylation data with RNA sequencing data to identify markers for bull fertility |
| GSE143658 |
Chromatin remodeling in bovine embryos indicates species-specific regulation of genome activation |
| GSE146041 |
Rewiring of gene expression in PWBC at artificial insemination is predictive of pregnancy outcome in cattle (Bos taurus) |
| GSE147630 |
Temporal changes in mRNA abundance in the corpus luteum during early pregnancy |
| GSE147631 |
Temporal changes in the corpus luteum during early pregnancy |
| GSE148056 |
Elucidation of the open chromatin regions in the bronchial lymph nodes of dairy calves experimentally challenged with bovine respiratory syncytial virus, using ATAC-Seq |
| GSE148225 |
Plasma extracellular vesicle miRNAs as potential biomarkers for superstimulatory response in cattle |
| GSE148909 |
Transcriptome profiling of two purebred cattle and their crossbreds |
| GSE151033 |
Elucidation of the host bronchial lymph node miRNA transcriptome response to bovine respiratory syncytial virus |
| GSE157053 |
Profiling of histone modifications in bovine embryonic stem cells |
| GSE159224 |
Transcriptomic profiling of adipose tissue in periparturient dairy cows |
| GSE160502 |
Effect of over-conditioning on the hepatic global gene expression pattern of dairy cows at the end of pregnancy |
| GSE163425 |
Robust Three-dimensional (3D) Expansion of Bovine Intestinal Stem Cells: A Model for Replacement of Animal Experiments Toward Animal Welfare |
| GSE166206 |
Transcriptome changes associated with marbling fineness in the longissimus thoracis of Korean cattle steer |
| GSE166413 |
Seasonal Heat Stress Effects on Transcriptomic Profiles and DNA Methylation of Bovine Oocytes |
| GSE167086 |
Endometrium on-a-chip reveals insulin- and glucose-induced alterations in the transcriptome |
| GSE173196 |
A serum-free media formulation for cultured meat production supports bovine satellite cell differentiation in the absence of serum starvation [SF_Diff] |
| GSE173198 |
A serum-free media formulation for cultured meat production supports bovine satellite cell differentiation in the absence of serum starvation [Timecourse] |
| GSE173199 |
A serum-free media formulation for cultured meat production supports bovine satellite cell differentiation in the absence of serum starvation |
| GSE178436 |
Comparing mRNA and sncRNA profiles during the maternal-to-embryonic transition in bovine IVF and scNT embryos [mRNA] |
| GSE178438 |
Comparing mRNA and sncRNA profiles during the maternal-to-embryonic transition in bovine IVF and scNT embryos |
| GSE178450 |
RNA-sequencing of bovine fetal ovaries throughout gestation |
| GSE181149 |
Effects of maternal nutrient restriction during pregnancy on the adult offspring longissimus dorsi transcriptome in cattle |
| GSE181883 |
Creb5 coordinates synovial joint formation with the genesis of articular cartilage |
| GSE189296 |
Muscle-derived fibro-adipogenic progenitor cells for production of cultured bovine adipose tissue |
| GSE192908 |
Lycopene supplementation in serum-free maturation medium improves bovine in vitro embryo development, quality, and modulates embryonic transcriptomic profile |
| GSE193640 |
Chromatin remodeling in bovine oocytes and preimplantation embryos |
| GSE196166 |
Continuous activation of the IL-17F driven inflammatory pathway in acute and chronic digital dermatitis lesions in dairy cattle |
| GSE196789 |
RNA-Sequencing based analysis of bovine endometrium during the maternal recognition of pregnancy |
| GSE197876 |
Hatching is modulated by microRNA-378a-3p derived from extracellular vesicles secreted by blastocysts (mRNA) |
| GSE197878 |
Hatching is modulated by microRNA-378a-3p derived from extracellular vesicles secreted by blastocysts |
| GSE198293 |
Genome-wide H3K27me3 profile in in vitro produced bovine morula treated with MAT2A inhibitor |
| GSE198295 |
Profile in in vitro produced bovine morulae treated with MAT2A inhibitor |
| GSE205404 |
Influence of sire fertility status on conceptus-induced transcriptomic response of the bovine endometrium |
| GSE209699 |
TRANSCRIPTOMIC ANALYSIS OF BOVINE ENDOMETRIUM WITH SHORT UTERINE TRACT LEADING TO INFERTILITY |
| GSE209700 |
Uterine infection-induced transcriptomic changes in the bovine endometrium |
| GSE214467 |
Short heat shock has a long-term effect on mesenchymal stem cells’ transcriptome |
| GSE216685 |
Stress triggers expression of bovine herpesvirus 1 infected cell protein 4 (bICP4) RNA during early stages of reactivation from latency in pharyngeal tonsil |
| GSE221364 |
Several key elements in the pathogenesis of severe udder cleft dermatitis as revealed by RNA transcriptomics |
| GSE225854 |
miRNA profiling from peripheral white blood cells in fertile and subfertile beef heifers at weaning |
| GSE227559 |
Goat & cow milk-derived extracellular vesicle miRNomes |
| GSE231434 |
MicroRNA profiling of mammary gland and liver tissue of cows under different feeding conditions (control, restricted amount of milk replacer, milk replacer ad libitum) |
| GSE241059 |
Comparative gene expression profiling analysis of RNA-seq data for bovine macrophages infected with two Myocbacterium bovis strains of variable virulence and co-cultured with autologous lymphocytes. |
| GSE246306 |
Pyruvate metabolism alters the epigenetic and transcriptional profile of bovine oocytes. |
| GSE249434 |
Single-cell profiling reveals transcriptome dynamics during bovine oocyte growth |
| GSE250088 |
Theileria parasites sequester host eIF5A to escape elimination by host-mediated autophagy |
| GSE250281 |
MicroRNA-34c from follicular fluid-derived extracellular vesicles is a modulator of embryo quality |
| GSE252748 |
Expression profile and gap-junctional transfer of microRNAs in the bovine cumulus-oocyte complex |
| GSE253728 |
Deep sequencing after alcelaphine gammaherpesvirus 1 infection reveals the nature of CD8+ T cell expansion and identify an essential viral protein for fatal bovine malignant catarrhal fever [RNA-seq] |
| GSE253729 |
Deep sequencing after alcelaphine gammaherpesvirus 1 infection reveals the nature of CD8+ T cell expansion and identify an essential viral protein for fatal bovine malignant catarrhal fever |
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| Supplementary data files not provided |
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