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Series GSE198665 Query DataSets for GSE198665
Status Public on Apr 20, 2022
Title Transcriptome analysis of virgin and mated Anopheles gambiae and Anopheles albimanus
Organisms Anopheles gambiae; Anopheles albimanus
Experiment type Expression profiling by high throughput sequencing
Summary We custom-built a bioinformatics pipeline to search for 20E-modifying enzymes in the accessory glands of Anopheles gambiae males, searching for ecdysteroid kinases (EcK), ecdysone oxidases (EO), and ecdysteroid-phosphate phosphatases (EPP). To this end, we generated RNAseq datasets of different An. gambiae tissues dissected from virgin and mated females and males, and produced similar datasets for Anopheles albimanus, a South American species that does not synthetize and transfer ecdysteroids during mating. These analyses led to the identification of one candidate EPP and two potential EcKs (EcK1 and EcK2), which we demonstrated are involved in the activity of a male-specific oxidized ecdysteroid (3D20E). We further determined that 3D20E is specifically produced by the An. gambiae male accessory glands and is transferred to females during copulation, where it triggers a series of post-mating responses.
 
Overall design RNAseq datasets of different Anopheles gambiae and Anopheles albimanus tissues dissected from virgin and mated females and males. Tissues analyzed included: male accessory glands and rest of the body (for males); atria, head, spermatheca and rest of body (for females).
 
Contributor(s) Kakani EG, Mitchell SN, Peng D, Shaw WR, Catteruccia F
Citation(s) 35794471
Submission date Mar 15, 2022
Last update date Aug 16, 2022
Contact name Flaminia Catteruccia
Organization name Harvard University
Street address 655 huntington ave
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (2)
GPL32062 Illumina HiSeq 2500 (Anopheles albimanus)
GPL32063 Illumina HiSeq 2500 (Anopheles gambiae)
Samples (88)
GSM5954543 BT3_ALBI_At_M
GSM5954544 DT3_ALBI_At_M
GSM5954545 BT3_ALBI_At_V
Relations
BioProject PRJNA816430

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE198665_RAW.tar 4.5 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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