|
| Status |
Public on May 11, 2011 |
| Title |
Rhesus macaque aCGH |
| Organism |
Macaca mulatta |
| Experiment type |
Genome variation profiling by genome tiling array
|
| Summary |
Sixteen individual rhesus macaque genomes were compared to a reference macaque genome (R354) on custom-designed sure-print 1M oligonucleotide microarray Agilent (Agilent Technologies) aCGH slide per manufacturer’s recommendations.
|
| |
|
| Overall design |
a custom designed Agilent array-based comparative genomic hybridization (aCGH) platform, which comprises 950,843 unique 60-mer oligonucleotide probes specific to the rhesus macaque reference genome (rheMac2), to compare the genomic DNAs of 17 unrelated rhesus macaques of Indian origin to the genome of an unrelated sample from the same species.
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| |
|
| Contributor(s) |
Gokcumen O |
| Citation(s) |
21627829 |
| |
| Submission date |
Jan 13, 2010 |
| Last update date |
Mar 21, 2012 |
| Contact name |
Omer Gokcumen |
| E-mail(s) |
gokcumen@gmail.com
|
| Phone |
7166454937
|
| Organization name |
University at Buffalo
|
| Department |
Biological Sciences
|
| Street address |
109 Cooke Hall
|
| City |
Buffalo |
| State/province |
New York |
| ZIP/Postal code |
14260 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL9903 |
Agilent-022770 Macaca mulatta 951K rheMac2 TargetedRegionsRSmith |
|
| Samples (17)
|
|
| Relations |
| BioProject |
PRJNA122017 |
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