|
| Status |
Public on Mar 18, 2022 |
| Title |
CLIP-seq of E. coli YhgF |
| Organism |
Escherichia coli str. K-12 substr. MG1655 |
| Experiment type |
Other
|
| Summary |
YhgF is an uncharacterized protein in E. coli. We have shown through RNA interactome capture and other methods that it interacts with RNA. The aim of this study was to indentify in vivo RNA-targets of YhgF by using CLIP-seq.
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| |
|
| Overall design |
CLIP-seq
|
| |
|
| Contributor(s) |
Søndergaard Stenum T, Kjellin J, Holmqvist E |
| Citation(s) |
36987847 |
| |
| Submission date |
Mar 18, 2022 |
| Last update date |
Aug 11, 2023 |
| Contact name |
Erik Holmqvist |
| E-mail(s) |
erik.holmqvist@icm.uu.se
|
| Organization name |
Uppsala University
|
| Street address |
Husargatan 3, Box 596, Uppsala University, Dept. of Cell and Molecular Biology
|
| City |
Uppsala |
| State/province |
Uppland |
| ZIP/Postal code |
75124 |
| Country |
Sweden |
| |
|
| Platforms (1) |
| GPL21117 |
Illumina NextSeq 500 (Escherichia coli str. K-12 substr. MG1655) |
|
| Samples (6)
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|
| Relations |
| BioProject |
PRJNA817565 |
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