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| Status |
Public on Apr 05, 2023 |
| Title |
Escape From Oncogene-Induced Senescence is Controlled by POU2F2 and Memorized by Chromatin Scars |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
37082139 |
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| Submission date |
Jun 20, 2022 |
| Last update date |
May 12, 2023 |
| Contact name |
Ricardo Iván Martínez Zamudio |
| E-mail(s) |
rm1238@rwjms.rutgers.edu
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| Organization name |
Rutgers Biomedical and Health Sciences | Rutgers-Robert Wood Johnson Medical School
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| Department |
Pharmacology
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| Lab |
Martínez Zamudio Lab
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| Street address |
675 Hoes Lane West
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| City |
Piscataway |
| State/province |
New Jersey |
| ZIP/Postal code |
08854 |
| Country |
USA |
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| Platforms (3) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
| GPL17586 |
[HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version] |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
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| Samples (101)
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| GSM6217436 |
GM21 fibroblasts, empty vector, biol rep 1, day 32 |
| GSM6217439 |
GM21 fibroblasts, empty vector, biol rep 1, day 56 |
| GSM6217443 |
GM21 fibroblasts, empty vector, biol rep 1, day 8 |
| GSM6217445 |
GM21 fibroblasts, RAS, biol rep 1, day 13 |
| GSM6217446 |
GM21 fibroblasts, RAS, biol rep 1, day 18 |
| GSM6217447 |
GM21 fibroblasts, RAS, biol rep 1, day 21 |
| GSM6217448 |
GM21 fibroblasts, RAS, biol rep 1, day 23 |
| GSM6217449 |
GM21 fibroblasts, RAS, biol rep 1, day 32 |
| GSM6217450 |
GM21 fibroblasts, RAS, biol rep 1, day 46 |
| GSM6217451 |
GM21 fibroblasts, RAS, biol rep 1, day 50 |
| GSM6217452 |
GM21 fibroblasts, RAS, biol rep 1, day 56 |
| GSM6217453 |
GM21 fibroblasts, RAS, biol rep 1, day 8 |
| GSM6217454 |
GM21 fibroblasts, empty vector, biol rep 2, day 32 |
| GSM6217455 |
GM21 fibroblasts, empty vector, biol rep 2, day 56 |
| GSM6217456 |
GM21 fibroblasts, empty vector, biol rep 2, day 8 |
| GSM6217457 |
GM21 fibroblasts, RAS, biol rep 2, day 14 |
| GSM6217458 |
GM21 fibroblasts, RAS, biol rep 2, day 19 |
| GSM6217459 |
GM21 fibroblasts, RAS, biol rep 2, day 21 |
| GSM6217460 |
GM21 fibroblasts, RAS, biol rep 2, day 22 |
| GSM6217461 |
GM21 fibroblasts, RAS, biol rep 2, day 25 |
| GSM6217462 |
GM21 fibroblasts, RAS, biol rep 2, day 32 |
| GSM6217463 |
GM21 fibroblasts, RAS, biol rep 2, day 45 |
| GSM6217464 |
GM21 fibroblasts, RAS, biol rep 2, day 56 |
| GSM6217465 |
GM21 fibroblasts, RAS, biol rep 2, day 8 |
| GSM6217466 |
GM21 fibroblasts, empty vector, biol rep 3, day 32 |
| GSM6217467 |
GM21 fibroblasts, empty vector, biol rep 3, day 56 |
| GSM6217468 |
GM21 fibroblasts, empty vector, biol rep 3, day 8 |
| GSM6217469 |
GM21 fibroblasts, RAS, biol rep 3, day 13 |
| GSM6217470 |
GM21 fibroblasts, RAS, biol rep 3, day 22 |
| GSM6217471 |
GM21 fibroblasts, RAS, biol rep 3, day 25 |
| GSM6217472 |
GM21 fibroblasts, RAS, biol rep 3, day 32 |
| GSM6217473 |
GM21 fibroblasts, RAS, biol rep 3, day 45 |
| GSM6217474 |
GM21 fibroblasts, RAS, biol rep 3, day 56 |
| GSM6217475 |
GM21 fibroblasts, RAS, biol rep 3, day 8 |
| GSM6235098 |
GM21, Day 0, Rep 1, K27ac, ActiveMotif |
| GSM6235099 |
GM21, Day 0, Rep 2, K27ac, ActiveMotif |
| GSM6235100 |
GM21, Day 0, Rep 1, K4me1, ActiveMotif |
| GSM6235101 |
GM21, Day 0, Rep 2, K4me1, ActiveMotif |
| GSM6235102 |
GM21, Day 0, Rep 1, input |
| GSM6235103 |
GM21, Day 0, Rep 2, input |
| GSM6235104 |
GM21, Day 10, Rep 1, K27ac, ActiveMotif |
| GSM6235105 |
GM21, Day 10, Rep 2, K27ac, ActiveMotif |
| GSM6235106 |
GM21, Day 10, Rep 1, K4me1, ActiveMotif |
| GSM6235107 |
GM21, Day 10, Rep 2, K4me1, ActiveMotif |
| GSM6235108 |
GM21, Day 10, Rep 1, input |
| GSM6235109 |
GM21, Day 10, Rep 2, input |
| GSM6235110 |
GM21, Day 18, Rep 1, K27ac, ActiveMotif |
| GSM6235111 |
GM21, Day 18, Rep 2, K27ac, ActiveMotif |
| GSM6235112 |
GM21, Day 18, Rep 1, K4me1, ActiveMotif |
| GSM6235113 |
GM21, Day 18, Rep 2, K4me1, ActiveMotif |
| GSM6235114 |
GM21, Day 18, Rep 1, input |
| GSM6235115 |
GM21, Day 18, Rep 2, input |
| GSM6235116 |
GM21, Day 22, Rep 1, K27ac, ActiveMotif |
| GSM6235117 |
GM21, Day 22, Rep 2, K27ac, ActiveMotif |
| GSM6235118 |
GM21, Day 22, Rep 1, K4me1, ActiveMotif |
| GSM6235119 |
GM21, Day 22, Rep 2, K4me1, ActiveMotif |
| GSM6235120 |
GM21, Day 22, Rep 1, input |
| GSM6235121 |
GM21, Day 22, Rep 2, input |
| GSM6235122 |
GM21, Day 32, Rep 1, K27ac, ActiveMotif |
| GSM6235123 |
GM21, Day 32, Rep 2, K27ac, ActiveMotif |
| GSM6235124 |
GM21, Day 32, Rep 1, K4me1, ActiveMotif |
| GSM6235125 |
GM21, Day 32, Rep 2, K4me1, ActiveMotif |
| GSM6235126 |
GM21, Day 32, Rep 1, input |
| GSM6235127 |
GM21, Day 32, Rep 2, input |
| GSM6253122 |
GM21 fibroblasts, empty vector, day 32 post-transduction rep1 |
| GSM6253123 |
GM21 fibroblasts, empty vector, day 32 post-transduction rep2 |
| GSM6253124 |
GM21 fibroblasts, empty vector, day 56 post-transduction rep1 |
| GSM6253125 |
GM21 fibroblasts, empty vector, day 56 post-transduction rep2 |
| GSM6253126 |
GM21 fibroblasts, empty vector, day 8 post-transduction rep1 |
| GSM6253127 |
GM21 fibroblasts, empty vector, day 8 post-transduction rep2 |
| GSM6253128 |
GM21 fibroblasts, empty vector, day 8 post-transduction rep3 |
| GSM6253129 |
GM21 fibroblasts, empty vector, day 8 post-transduction rep4 |
| GSM6253130 |
GM21 fibroblasts, RAS overexpression, day 14 post-transduction rep1 |
| GSM6253131 |
GM21 fibroblasts, RAS overexpression, day 14 post-transduction rep2 |
| GSM6253132 |
GM21 fibroblasts, RAS overexpression, day 18 post-transduction rep1 |
| GSM6253133 |
GM21 fibroblasts, RAS overexpression, day 18 post-transduction rep2 |
| GSM6253134 |
GM21 fibroblasts, RAS overexpression, day 23 post-transduction rep1 |
| GSM6253135 |
GM21 fibroblasts, RAS overexpression, day 23 post-transduction rep2 |
| GSM6253136 |
GM21 fibroblasts, RAS overexpression, day 23 post-transduction rep3 |
| GSM6253137 |
GM21 fibroblasts, RAS overexpression, day 23 post-transduction rep4 |
| GSM6253138 |
GM21 fibroblasts, RAS overexpression, day 32 post-transduction rep1 |
| GSM6253139 |
GM21 fibroblasts, RAS overexpression, day 32 post-transduction rep2 |
| GSM6253140 |
GM21 fibroblasts, RAS overexpression, day 45 post-transduction rep1 |
| GSM6253141 |
GM21 fibroblasts, RAS overexpression, day 45 post-transduction rep2 |
| GSM6253142 |
GM21 fibroblasts, RAS overexpression, day 56 post-transduction rep1 |
| GSM6253143 |
GM21 fibroblasts, RAS overexpression, day 56 post-transduction rep2 |
| GSM6253144 |
GM21 fibroblasts, RAS overexpression, day 8 post-transduction rep1 |
| GSM6253145 |
GM21 fibroblasts, RAS overexpression, day 8 post-transduction rep2 |
| GSM6253146 |
GM21 fibroblasts, RAS overexpression, day 8 post-transduction rep3 |
| GSM6255295 |
GM21 fibroblasts, pLKO, Day 14 post RAS overexpression rep1 |
| GSM6255296 |
GM21 fibroblasts, pLKO, Day 14 post RAS overexpression rep2 |
| GSM6255297 |
GM21 fibroblasts, shPOU2F2 #324, Day 14 post RAS overexpression rep1 |
| GSM6255298 |
GM21 fibroblasts, shPOU2F2 #324, Day 14 post RAS overexpression rep2 |
| GSM6255299 |
GM21 fibroblasts, shPOU2F2 #325, Day 14 post RAS overexpression rep1 |
| GSM6255300 |
GM21 fibroblasts, shPOU2F2 #325, Day 14 post RAS overexpression rep2 |
| GSM6255301 |
GM21 fibroblasts, pLKO, Day 27 post RAS overexpression rep1 |
| GSM6255302 |
GM21 fibroblasts, pLKO, Day 27 post RAS overexpression rep2 |
| GSM6255303 |
GM21 fibroblasts, shPOU2F2 #324, Day 27 post RAS overexpression rep1 |
| GSM6255304 |
GM21 fibroblasts, shPOU2F2 #324, Day 27 post RAS overexpression rep2 |
| GSM6255305 |
GM21 fibroblasts, shPOU2F2 #325, Day 27 post RAS overexpression rep1 |
| GSM6255306 |
GM21 fibroblasts, shPOU2F2 #325, Day 27 post RAS overexpression rep2 |
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| This SuperSeries is composed of the following SubSeries:
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| GSE205692 |
Escape From Oncogene-Induced Senescence is Controlled by POU2F2 and Memorized by Chromatin Scars [Expression] |
| GSE205898 |
Escape From Oncogene-Induced Senescence is Controlled by POU2F2 and Memorized by Chromatin Scars [ChIP-seq] |
| GSE206402 |
Escape From Oncogene-Induced Senescence is Controlled by POU2F2 and Memorized by Chromatin Scars [ATAC-seq] |
| GSE206493 |
Escape From Oncogene-Induced Senescence is Controlled by POU2F2 and Memorized by Chromatin Scars [RNA-seq] |
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| Relations |
| BioProject |
PRJNA851070 |
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