NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE209548 Query DataSets for GSE209548
Status Public on Dec 22, 2023
Title An inflammatory single-cell RNA sequencing signature driven by metabolic stress in a new mouse model of heart failure with preserved ejection fraction and its reversion by the SGLT2 inhibitor dapagliflozin [RNA-seq cardiomyocytes]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Heart failure with preserved ejection fraction (HFpEF) is a public health problem with increasing incidence and prevalence. Different phenotypes have been identified based on related risk factors, cardiac structural alterations, biomarkers and prognosis. Among these, the one with the worst prognosis is characterized by metabolic dysfunction . This clinical phenotype exhibits high levels of biomarkers related to dysregulated metabolism and TNF-a–mediated inflammation, thus underlying its close association with metabolic dysfunction and inflammation. The aim of our work is to better comprehend the involvement of the immune cells in the pathogenesis of metabolic HFpEF and the effect of local inflammatory activation on cardiomyocyte function.
 
Overall design 7–8-week-old male C57BL/6J (RRID:IMSR_JAX:000664) and ApoE KO (B6.129P2-Apoe tm1Unc/J) mice (Charles River, France) were fed with standard chow (CD) or a high fat (HFD) (Western diet, high fat/high cholesterol 0.21%; Sniff EF D12079) diet for 7 or.
 
Contributor(s) Kunderfranco P, Panico C, Felicetta A, Condorelli G, Greco CM
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jul 22, 2022
Last update date Dec 23, 2023
Contact name Paolo Kunderfranco
E-mail(s) Paolo.Kunderfranco@humanitasresearch.it
Organization name Humanitas Research Hospital
Department Research
Lab Bioinformatic Unit
Street address Via Rita Levi Montalcini 4
City Pieve Emanuele
State/province Milano
ZIP/Postal code 20090
Country Italy
 
Platforms (1)
GPL21626 NextSeq 550 (Mus musculus)
Samples (12)
GSM6376729 Wt CD, replicate 1
GSM6376730 Wt CD, replicate 2
GSM6376731 Wt CD, replicate 3
This SubSeries is part of SuperSeries:
GSE209549 Single-Cell RNA Sequencing Reveals Metabolic Stress-Dependent Activation of Cardiac Macrophages in a Model of Dyslipidemia-Induced Diastolic Dysfunction
Relations
BioProject PRJNA861395

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE209548_RAW.tar 2.7 Mb (http)(custom) TAR (of TAB)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap