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Series GSE209606 Query DataSets for GSE209606
Status Public on Oct 13, 2022
Title Morphine Alters Systemic Responses to SIV Infection of Rhesus Monkeys and Changes Brain Macrophage and Microglia Gene Expression Favoring Neuropathogenesis
Organism Macaca mulatta
Experiment type Expression profiling by high throughput sequencing
Summary In this study, we investigated longitudinal changes in response to SIV infection of rhesus monkeys in the presence of morphine, compared to animals administered saline, before and after cART treatment. Using single-cell and single-nucleus RNA sequencing (scRNA-seq and snRNA-seq), we examined the effect of morphine on brain-resident macrophages and microglia in these SIV-infected, cART-suppressed animals to better understand the factors responsible for the morphine-induced increased CNS reservoir and the role of opioids in neuropathogenesis.
 
Overall design We probed systemic parameters as well as performed single-cell examination of the targets for infection in the brain, microglia and macrophages to investigate the interaction of morphine and SIV to identify novel host specific immune and neurological pathologies. Morphine treatment created an immunosuppressive environment, blunting initial responses to SIV infection which persisted during suppressive antiretroviral drug (ARV) therapy. ARV concentrations and penetration into the cerebrospinal fluid and brain were unchanged by morphine. However, in microglia and brain macrophages, their transcriptional signature was transformed to a neurodegenerative phenotype.
 
Contributor(s) Fox HS, Morsey BM, Niu M, Buch S
Citation(s) 36466814
Submission date Jul 23, 2022
Last update date Jan 03, 2023
Contact name Meng Niu
E-mail(s) vincentnue@gmail.com
Phone 4025595925
Organization name University of Nebraska Medical Center
Department Department of Neurological sciences
Street address 42nd and Emile
City OMAHA
State/province NE
ZIP/Postal code 68198
Country USA
 
Platforms (2)
GPL27943 Illumina NovaSeq 6000 (Macaca mulatta)
GPL29319 NextSeq 550 (Macaca mulatta)
Samples (23)
GSM6380430 77T
GSM6380431 82T
GSM6380432 83T
Relations
BioProject PRJNA861668

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Supplementary file Size Download File type/resource
GSE209606_RAW.tar 561.4 Mb (http)(custom) TAR (of H5)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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