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| Status |
Public on Sep 05, 2022 |
| Title |
Transcriptome profiling time course of ZPR1-depleted S.cerevisiae cells |
| Organism |
Saccharomyces cerevisiae |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
The aim of this study was to gain insight into the temporal dynamics of the transcriptome on depletion of the essntial eukaryotic gene ZPR1 in S.cerevisiae.
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| Overall design |
Comparative gene expression analysis of bulk RNA-seq data on ZPR1 depletion in a S.cerevisae stran where is ZPR1 is C-terminally tagged with an auxin-induclible degron (ZPR1-AID). Samples collected at multiple timepooints after addition of auxin derivative, 5-Ph-IAA.
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| Contributor(s) |
Denic V, Sabbarini IM, Reif D, McQuown AJ, Nelliat AR, Prince J, Membreno BS, Wu CC, Murray AW |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Aug 31, 2022 |
| Last update date |
Sep 05, 2022 |
| Contact name |
Vladimir Denic |
| E-mail(s) |
vdenic@mcb.harvard.edu
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| Organization name |
Harvard University
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| Street address |
52 Oxford St
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| City |
Cambridge |
| State/province |
MA |
| ZIP/Postal code |
02138 |
| Country |
USA |
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| Platforms (1) |
| GPL13821 |
Illumina HiSeq 2000 (Saccharomyces cerevisiae) |
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| Samples (15)
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| Relations |
| BioProject |
PRJNA875287 |
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