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Series GSE214698 Query DataSets for GSE214698
Status Public on Oct 06, 2022
Title Nutrient regulation of lipochitooligosaccharide recognition in plants via NSP1 and NSP2
Organisms Medicago truncatula; Hordeum vulgare
Experiment type Expression profiling by high throughput sequencing
Summary Many plants associate with arbuscular mycorrhizal fungi for nutrient acquisition, while legumes also associate with nitrogen-fixing rhizobial bacteria. Both associations rely on symbiosis signaling and here we show that cereals can perceive lipochitooligosaccharides (LCOs) for activation of symbiosis signaling, surprisingly including Nod factors produced by nitrogen-fixing bacteria. However, legumes show stringent perception of specifically decorated LCOs, that is absent in cereals. LCO perception in plants is activated by nutrient starvation, through transcriptional regulation of Nodulation Signaling Pathway (NSP)1 and NSP2. These transcription factors induce expression of an LCO receptor and act through the control of strigolactone biosynthesis and the karrikin-like receptor DWARF14-LIKE. We conclude that LCO production and perception is coordinately regulated by nutrient starvation to promote engagement with mycorrhizal fungi. Our work has implications for the use of both mycorrhizal and rhizobial associations for sustainable productivity in cereals.
 
Overall design RNA-seq of M. truncatula genes after various nutrient treatments (+P+N, +P-N, -P+N, -P-N) in wildtype (A17) and mutant (Mtnsp1-1, Mtnsp2-2) lines, with transgenic lines (MtNSP1ox, MtNSP2ox, miRR-MtNSP2ox) under +N+P treatment; RNA-seq of H. vulgare genes after various nutrient treatments (+P+N, +P-N, -P+N, -P-N) in wildtype (Golden Promise) and mutant (Hvnsp1-1, Hvnsp2-1) lines, with transgenic lines (MtNSP1ox, MtNSP2ox) under +N+P treatment
 
Contributor(s) Li X
Citation(s) 36307431
Submission date Oct 03, 2022
Last update date Nov 17, 2022
Contact name Darius Zarrabian
E-mail(s) dtz21@cam.ac.uk
Organization name Crop Science Centre, University of Cambridge
Department Plant Sciences
Street address 93 Lawrence Weaver Rd
City Cambridge
ZIP/Postal code CB3 0LE
Country United Kingdom
 
Platforms (2)
GPL29652 Illumina NovaSeq 6000 (Hordeum vulgare)
GPL30272 Illumina NovaSeq 6000 (Medicago truncatula)
Samples (90)
GSM6614382 Mt_A17_+P+N_rep1
GSM6614383 Mt_A17_+P+N_rep2
GSM6614384 Mt_A17_+P+N_rep3
Relations
BioProject PRJNA886698

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE214698_rawcounts_Hv.tsv.gz 3.3 Mb (ftp)(http) TSV
GSE214698_rawcounts_Mt.tsv.gz 1.7 Mb (ftp)(http) TSV
GSE214698_rawcounts_Mt_NSPox.tsv.gz 718.8 Kb (ftp)(http) TSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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