|
| Status |
Public on May 03, 2011 |
| Title |
Global gene expression profile of Haemophilus ducreyi 35000HPcpxRpML125 relative to 35000HPcpxRpLS88 |
| Platform organism |
[Haemophilus] ducreyi 35000HP |
| Sample organism |
[Haemophilus] ducreyi |
| Experiment type |
Expression profiling by array
|
| Summary |
Haemophilus ducreyi 35000HPcpxRpML125 which over-expresses CpxR in a CpxR deletion background, was compared to it vector alone counterpart (35000HPcpxRpLS88) in hopes to elucidate members of the CpxRA regulon.
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| |
|
| Overall design |
Haemophilus ducreyi 35000HPcpxRpML125 and 35000HPcpxRpLS88 were grown in Columbia broth. After 8 hr of growth, total RNA was isolated and processed for DNA microarray analysis. This study includes 3 biological replicates (paired samples), two of which were selected for dye swap.
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| |
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| Citation(s) |
20805330 |
| Submission date |
May 11, 2010 |
| Last update date |
Mar 22, 2012 |
| Contact name |
Eric J Hansen |
| E-mail(s) |
eric.hansen@utsouthwestern.edu
|
| Phone |
2146331386
|
| Organization name |
University of Texas Southwestern Medical Center
|
| Department |
Microbiology
|
| Lab |
Eric J. Hansen
|
| Street address |
5323 Harry Hines Blvd
|
| City |
Dallas |
| State/province |
TX |
| ZIP/Postal code |
75390-9048 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL7741 |
EJH Hducreyi Oligo DNA Microarray 1 |
|
| Samples (6)
|
| GSM542698 |
Haemophilus ducreyi 35000HPcpxRpML125 relative to 35000HPcpxRpLS88 sample 1 |
| GSM542699 |
Haemophilus ducreyi 35000HPcpxRpML125 relative to 35000HPcpxRpLS88 sample 2 |
| GSM542700 |
Haemophilus ducreyi 35000HPcpxRpML125 relative to 35000HPcpxRpLS88 sample 3 |
| GSM542701 |
Haemophilus ducreyi 35000HPcpxRpML125 relative to 35000HPcpxRpLS88 sample 4 |
| GSM542702 |
Haemophilus ducreyi 35000HPcpxRpML125 relative to 35000HPcpxRpLS88 sample 5 |
| GSM542703 |
Haemophilus ducreyi 35000HPcpxRpML125 relative to 35000HPcpxRpLS88 sample 6 |
|
| Relations |
| BioProject |
PRJNA127319 |
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