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| Status |
Public on Jul 19, 2023 |
| Title |
Transcriptome analysis Arabidopsis Col-0 plants grown in gnotobiotic growth system |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
37591928 |
| Submission date |
Nov 29, 2022 |
| Last update date |
Sep 27, 2023 |
| Contact name |
Reza Sohrabi |
| Organization name |
Duke University
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| Department |
Biology
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| Lab |
Sheng Yang He Lab
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| Street address |
FFSC Bldg rm 4305, 124 Science Dr,
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| City |
Durham |
| State/province |
NC |
| ZIP/Postal code |
27708 |
| Country |
USA |
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| Platforms (2) |
| GPL17639 |
Illumina HiSeq 2500 (Arabidopsis thaliana) |
| GPL26208 |
Illumina NovaSeq 6000 (Arabidopsis thaliana) |
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| Samples (21)
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| GSM6760857 |
Col-0, MSU, AX, Rep1 |
| GSM6760858 |
Col-0, MSU, AX, Rep2 |
| GSM6760859 |
Col-0, MSU, AX, Rep3 |
| GSM6760860 |
Col-0, Malaka, HO, Rep1 |
| GSM6760861 |
Col-0, Malaka, HO, Rep2 |
| GSM6760862 |
Col-0, Malaka, HO, Rep3 |
| GSM6760863 |
Col-0, MSU, HO, Rep1 |
| GSM6760864 |
Col-0, MSU, HO, Rep2 |
| GSM6760865 |
Col-0, MSU, HO, Rep3 |
| GSM6760866 |
Col-0, SynCom-Col-0, Rep1 |
| GSM6760867 |
Col-0, SynCom-Col-0, Rep2 |
| GSM6760868 |
Col-0, SynCom-Col-0, Rep3 |
| GSM6760869 |
Col-0, SynCom-mfec, Rep1 |
| GSM6760870 |
Col-0, SynCom-mfec, Rep2 |
| GSM6760871 |
Col-0, SynCom-mfec, Rep3 |
| GSM7664098 |
Col-0, Ax, Rep1 |
| GSM7664099 |
Col-0, Ax, Rep2 |
| GSM7664100 |
Col-0, Ax, Rep3 |
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| This SuperSeries is composed of the following SubSeries: |
| GSE218961 |
Transcriptome analysis Arabidopsis Col-0 plants grown under axenic and holoxenic conditions in FlowPot gnotobiotic growth system |
| GSE218962 |
Transcriptome analysis Arabidopsis Col-0 plants grown in presence of SynComCol-0, SynCommfec and under axenic condition in Gnotopot growth system |
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| Relations |
| BioProject |
PRJNA906457 |
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