GEO Accession viewer

GSE133411	FIERY1 promotes microRNA accumulation by suppressing rRNA-derived small interfering RNAs in Arabidopsis [RNA-seq]
GSE133461	FIERY1 promotes microRNA accumulation by suppressing rRNA-derived small interfering RNAs in Arabidopsis
GSE135962	Plant 22-nt siRNAs mediate translational repression and stress adaptation
GSE136164	Plant 22-nt siRNAs mediate translational repression and stress adaptation
GSE138627	Control of lateral root formation by rapamycin-induced dimerization of engineered RGI/BAK1 and by BIR3 chimera
GSE140705	Genome-wide maps of SMXL6 binding sites in Arabidopsis seedlings [pSMXL6:SMXL6-HA]
GSE140977	Cellular trajectory analysis links tissue maturation to cellular specialization in the plant meristem II
GSE141916	MYB30 orchestras ROS wave-triggered systemic transcriptomic responses and plant acclimation in Arabidopsis
GSE142369	BRIP1/2 are core members of SWI/SNF complex
GSE142621	Genome-wide profiling of SWI/SNF chromatin remodeler BRAHMA (BRM) and BRM Interacting Protein 1/2 (BRIP1/2) in Arabidopsis
GSE144181	Aphid feeding induces the relaxation of epigenetic control and the associated regulation of the defense response in Arabidopsis
GSE144356	PAMP-triggered genetic reprogramming involves widespread alternative transcription initiation and an immediate transcription factor wave
GSE145109	The m6A reader CPSF30-L regulates alternative polyadenylation affecting nitrate signaling in Arabidopsis
GSE146126	H3.1K27me1 maintains transcriptional silencing and genome stability by preventing GCN5-mediated histone acetylation
GSE146948	The histone variant H2A.W and linker histone H1 co-regulate heterochromatin accessibility and DNA methylation
GSE147289	Single-Cell RNA-seq analysis of cell lineages in De Novo Root Regeneration
GSE147296	Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
GSE147301	Time-lapse RNA-seq analysis to study transcriptional regulation by early signals in De Novo Root Regeneration in Arabidopsis
GSE148173	Noncoding RNA-mediated DNA methylation directs nucleosome positioning
GSE148513	22-nucleotide siRNAs mediate translational repression and trigger a silencing storm
GSE148934	A viral guide RNA delivery system for CRISPR-based transcriptional activation and heritable targeted DNA demethylation
GSE149060	Elucidation of DNA Methylation on N6-Adenine with Deep Learning
GSE149816	PRC2-mediated H3K27me3 regulates iron homeostasis genes in the shoots of Arabidopsis thaliana
GSE149840	CRISPR-based targeting of DNA methylation in Arabidopsis thaliana by a bacterial CG specific DNA methyltransferase.
GSE151616	Efficient and accurate determination of genome-wide DNA methylation patterns in Arabidopsis thaliana with enzymatic methyl sequencing
GSE152030	RNA sequencing reveals the genetic relationship between TOPPs and its regulatory subunit PP1R3 in Arabidopsis thaliana
GSE152565	Total RNA sequencing of progenies of Col-0 grafted on msh1; Col-0 grafted on dcl2,3,4,msh1; Col-0 grafted on Col-0 in Arabidopsis [msh1_graft_leaf_RNA-seq]
GSE152566	RNA sequencing of progenies of Col-0 grafted on msh1; Col-0 grafted on dcl2,3,4,msh1 quadruple mutant in Arabidopsis [msh1_graft_root_RNA-seq]
GSE152570	Heritable enhanced growth vigor through grafting is associated with the RdDM pathway in plants
GSE152579	The Chloroplast RNA Binding Protein CP31A Has a Preference for mRNAs Encoding the Subunits of the Chloroplast NDH Complex and is Required for Their Accumulation
GSE152766	Single-cell RNA-seq data of Arabidopsis root
GSE152949	Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and nid1 knockout mutant Transcripts
GSE153103	Time-course RNA-seq analysis of salt resonse in Arabidopsis and Marchantia
GSE153705	Histone H3K4 methyltransferase ATX1 positively regulates secondary wall biosynthesis in interfascicular fibers in Arabidopsis
GSE154473	DEAD-box RNA helicase 27-Mediated MicroRNA Biogenesis Is Essential for Zygote Division and Stem Cell Homeostasis in Arabidopsis
GSE154601	Transcriptome profiling from Arabidopsis thaliana overexpressing Jatropha curcas ERFVII2
GSE155178	A cis-regulatory atlas of maize single cells
GSE155317	DNA features beyond the transcription factor binding sites specify target recognition by plant bHLHs [DAP-seq]
GSE155321	DNA features beyond the transcription factor binding sites specify target recognition by plant bHLHs
GSE155623	Genome-wide maps of JMJ28pro::JMJ28:3xFLAG in 14 days old arabidopsis
GSE155624	RNA-seq of 14 days old arabidopsis in Col jmj28 andJMJ28np5-OE
GSE155625	RNA-seq of Col jmj28 andJMJ28np5-OE and genome-wide maps of JMJ28 binding in 14 day old arabidopsis
GSE155980	The cyanobacterium, Nostoc punctiforme can protect against programmed cell death and induce defence genes in Arabidopsis thaliana.
GSE156093	AGO4 participates in germination during salinity
GSE156570	TMK4-mediated Phosphorylation of FIP37 Regulates Auxin-triggered N6-methyladenosine mRNA Modification of Auxin Biosynthetic Genes in Arabidopsis
GSE156584	Two bHLH Transcription Factors, bHLH48 and bHLH60, Associate with PHYTOCHROME INTERACTING FACTOR 7 to Regulate Hypocotyl Elongation in Arabidopsis thaliana
GSE156597	Transgenerational effect of mutants in the RNA-directed DNA methylation pathway on the triploid block
GSE156990	RNA-seq analysis of callus of Arabidopsis WT and wox5-1 wox7-1
GSE156991	Single-cell RNA-seq analysis of Arabidopsis hypocotyl callus
GSE156992	Arabidopsis callus
GSE157150	Characterization of distinct types of open chromatin and their impacts on gene transcription in maize [MNase-seq]
GSE157152	Characterization of distinct types of open chromatin and their impacts on gene transcription in maize
GSE157196	RNA-seq analysis of WT, aipp3, aipp2, paipp2, aipp2/paipp2, cpl2, lhp1, and clf in Arabidopsis
GSE157435	Gene expression responses to ABA and to osmotic stress in the bon123 triple mutant
GSE157508	Next Generation Sequencing Facilitates Quantitative Analysis of wild-type and erf4 mutant Transcriptomes
GSE158027	Ectopic targeting of CG DNA methylation in Arabidopsis with the bacterial SssI methyltransferase.
GSE158133	Leaf excision evokes an ultradian gene expression rhythm to prime de novo root regeneration (eur1-11)
GSE158898	The impact of the genes BBX32 and HY5 on the high light - responsive transcriptome of Arabidopsis thaliana
GSE158907	Combinations of maternal-specific repressive epigenetic marks in the endosperm control seed dormancy
GSE158939	The mRNA expression profiles of the hypocotyl and root in WT and hy5
GSE158992	HEC regulation at high ambient temperature gene expression in Arabidopsis thaliana
GSE160285	Arabidopsis MORC proteins function in the efficient establishment of RNA directed DNA methylation
GSE160846	Transcriptomic responses of Arabidopsis thaliana lines WS and sku5 to the Blue Origin NS-12 and Virgin Galactic VP-03 suborbital flights
GSE161515	BRD1, BRD2 and BRD13 are core subunits of Arabidopsis SWI/SNF complexes [ChIP-seq]
GSE161516	Next Generation Sequencing Facilitates Quantitative Analysis of in 14-day-old wt, brm-1, brd1,2,13 and brm-1 brd1,2,13 seedlings
GSE161595	BRD1/2/13 are new core subunits of Arabidopsis SWI/SNF complexes
GSE161807	Genome wide analysis of the chromatin state and gene expression in Wild-type, tor-es mutant, and fie mutants
GSE162114	SPAAC-NAD-seq, a sensitive and accurate method to profile NAD+-capped transcripts
GSE162637	Dimorphic H3K27 methylation guides germline or vegetative cell fate dichotomy in male gametophytes [CUT&Tag]
GSE162638	Dimorphic H3K27 methylation guides germline or vegetative cell fate dichotomy in male gametophytes [ATAC-seq]
GSE162640	Dimorphic H3K27 methylation guides germline or vegetative cell fate dichotomy in male gametophytes
GSE162875	Multiplex genome-editing in Arabidopsis thaliana using Mb3Cas12a
GSE163057	Transcriptome analysis of wild type and sweet1 seeds upon treatments during germination
GSE164424	Next Generation Sequencing to Study FLK-affected genes
GSE164502	Title: Leaf transcriptomics of Catalan A. thaliana demes under alkaline and carbonated stress at 3h and 48 hours.
GSE165095	MBD5 and MBD6 couple DNA methylation to gene silencing through the J-domain protein SILENZIO
GSE166109	Transcriptome analysis of gene expression divergence in BBX11 mutation in red light
GSE166881	The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [ChIP-seq_27]
GSE166893	The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_22]
GSE166894	The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [SMARTSeq2]
GSE166897	The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis
GSE167288	A domesticated Harbinger transposase forms a complex with HDA6 and promotes histone H3 deacetylation at genes but not TEs in Arabidopsis
GSE167384	The histone variant H3.3 promotes the active chromatin state to repress flowering in Arabidopsis
GSE167503	A REF6-dependent H3K27me3-depleted state facilitates gene activation during germination in Arabidopsis [H3K27me3 ChIP-seq]
GSE167505	A REF6-dependent H3K27me3-depleted state facilitates gene activation during germination in Arabidopsis [REF6-HA ChIP-seq]
GSE167508	A REF6-dependent H3K27me3-depleted state facilitates gene activation during germination in Arabidopsis
GSE167633	JASMONATE-ZIM DOMAIN proteins engage Polycomb chromatin modifiers to modulate Jasmonate signaling in Arabidopsis [RNA-Seq]
GSE167636	JASMONATE-ZIM DOMAIN proteins engage Polycomb chromatin modifiers to modulate Jasmonate signaling in Arabidopsis [ChIP-Seq]
GSE167639	JASMONATE-ZIM DOMAIN proteins engage Polycomb chromatin modifiers to modulate Jasmonate signaling in Arabidopsis
GSE168118	The INO80 chromatin remodeling complex promotes thermomorphogenesis by connecting H2A.Z eviction and active transcription in Arabidopsis[RNA-seq]
GSE168120	The INO80 chromatin remodeling complex promotes thermomorphogenesis by connecting H2A.Z eviction and active transcription in Arabidopsis
GSE168538	N4-acetyldeoxycytosine DNA modification marks euchromatin regions in Arabidopsis thaliana.
GSE168891	RNA-seq analysis of WT, jmj28-3 in Arabidopsis
GSE168892	Genome-wide occupancy of JMJ28 in Arabidopsis
GSE168893	RNA-seq analysis of jmj28-3 and genome-wide occupancy of JMJ28 in Arabidopsis
GSE168899	mRNA-profiles of Arabidopsis thaliana Col-0 (wild type) and the mutant ctl1-2 roots 14d after germination
GSE168919	A primary cell wall cellulose-dependent defense mechanism against vascular pathogens revealed by time-resolved dual-transcriptomics
GSE169178	FVE promotes RNA-directed DNA methylation by facilitating the association of RNA polymerase V with chromatin [Bisulfite-seq]
GSE169180	FVE promotes RNA-directed DNA methylation by facilitating the association of RNA polymerase V with chromatin
GSE172278	Functionalized carbon nanotube toxicity in Arabidopsis leaves
GSE173812	Interplay between gene expression, histone modifications, and DNA methylation mediated by miR778 during beet cyst nematode parasitism of Arabidopsis [ChIP-seq]
GSE173818	Interplay between gene expression, histone modifications, and DNA methylation mediated by miR778 during beet cyst nematode parasitism of Arabidopsis [RNA-seq]
GSE173819	Interplay between gene expression, histone modifications, and DNA methylation mediated by miR778 during beet cyst nematode parasitism of Arabidopsis
GSE174428	PP2A B''a and B''b regulation gene expression in dark to red transition in Arabidopsis thaliana.
GSE174599	snRNA-seq of Arabidopsis thaliana flower meristems
GSE174656	AG- and AP3- domain specific FANS RNA-seq
GSE176007	Catabolism of strigolactones by a carboxylesterase
GSE176468	Control of nitrogen remobilization and senescence in Arabidopsis thaliana by DNA methylation dynamics
GSE177884	Genome-widebinding maps of arabidopsis WRKY63
GSE178189	H2A monoubiquitination targeting by cohesi n subunits in Arabidopsis
GSE178241	RECEPTOR LIKE PROTEIN KINASE 2 constrains proximal secondary vein branching in the Arabidopsis thaliana embryo
GSE178354	RNA-seq analysis of callus of Arabidopsis WT and plt1 plt2
GSE179283	Cell-wall damage activates DOF transcription factors to promote wound healing and tissue regeneration in Arabidopsis thaliana
GSE179488	A novel NGS-based method can improve the efficiency and sensitivity of Y2H screening with cDNA library
GSE179616	Mechanism of siRNA production by a plant Dicer-RNA complex in dicing-competent conformation
GSE180381	REVEILLE5 buffers the activity of CIRCADIAN CLOCK ASSOCIATED1 to modulate thermoresponsive hypocotyl growth in Arabidopsis [ChIP-seq]
GSE180382	REVEILLE5 buffers the activity of CIRCADIAN CLOCK ASSOCIATED1 to modulate thermoresponsive hypocotyl growth in Arabidopsis
GSE180587	RNA profiling of Col-0 and vil1-1 1-day-old seedlings in Arabidopsis
GSE180768	Next Generation Sequencing (m6A-seq) Reveals RNA m6A Methylation Patterns During the floral transition of Arobidopsis
GSE181178	A single-cell morpho-transcriptomic map of brassinosteroid action in the Arabidopsis root
GSE181484	The DREAM complex antagonizes WDR5a and represses the productive elongation of transcription in Arabidopsis [RNA-seq]
GSE181489	The DREAM complex antagonizes WDR5a and represses the productive elongation of transcription in Arabidopsis
GSE181536	Analyses of translatome combined with transcriptome in Arabidopsis shoot and root reveals new players responding to magnesium deficiency.
GSE181999	An Arabidopsis root phloem pole cell atlas reveals PINEAPPLE genes as transitioners to autotrophy [10x scRNA-seq]
GSE182115	Next Generation Sequencing Facilitates Quantitative Analysis of wild-type (WT) and ERF4 tansgenic plants (OE) Transcriptomes
GSE182411	Metabolic control of histone demethylation
GSE182673	An Arabidopsis root phloem pole cell atlas reveals PINEAPPLE genes as transitioners to autotrophy
GSE182779	Next generation sequencing comparing RNA-seq data from Arabidopsis Col-0 wild type and splicing factor mutant prp8a-14
GSE182929	The tetratricopeptide repeat and J-domain containing proteins DJC31 and DJC62 are involved in abiotic stress response in Arabidopsis thaliana
GSE183087	The thiolation modification of tRNA is essential for plant immunity
GSE183312	Functional genomic analysis of the SPL9 gene in Arabidopsis thaliana under low phosphate conditions
GSE183453	R-loop landscapes during parental-to-zygotic transition in zebrafish
GSE183557	Genome-wide histone 3 lysine 27 trimethylation patterns in wild type and CLF-deficient Arabidopsis plants after high humidity treatment [ChIP-seq]
GSE183558	Genome-wide expression analysis of Arabidopsis Col-0 plant and clf mutant plant under high humidity [RNA-seq]
GSE183559	Genome-wide histone 3 lysine 27 trimethylation patterns and expression analysis of WT and CLF-deficient Arabidopsis plants after high humidity treatment
GSE184508	Gene expression in roots of the proscoop12 mutant and the wild-type Ws, treated or not with SCOOP12 peptide.
GSE184511	scRNA-seq or Arabidopsis leaves
GSE184528	RNA-seq analysis of high nitrogen response (HN) in Arabidopsis roots of Col-0, agb1-2, wrky40, and wrky75
GSE184738	TONSOKU reads the histone H3.1 variant to mediate DNA repair during replication
GSE184982	bZIP17 regulates heat stress tolerance at reproductive stage in Arabidopsis [ChIP-seq]
GSE184983	bZIP17 regulates heat stress tolerance at reproductive stage in Arabidopsis [RNA-seq]
GSE184984	bZIP17 regulates heat stress tolerance at reproductive stage in Arabidopsis
GSE185114	Altered H3K27 trimethylation contributes to flowering time variations in polyploid Arabidopsis thaliana ecotypes
GSE185337	Comparative Transcriptomics Identifies Differentially Expressed Genes Regulating Gametic Development in Arabidopsis thaliana
GSE186152	Next Generation Sequencing Facilitates Quantitative Analysis of in 14-day-old wt and pkl seedlings.
GSE186156	Next Generation Sequencing Facilitates Quantitative Analysis of in 14-day-old wt and val1 val2 pkl seedlings.
GSE186157	VAL1/2 recruit PKL to target sites in arabidopsis genome
GSE186532	H3K9 demethylation-mediated transcriptional activation is required for male meiosis in Arabidopsis thaliana
GSE186546	The L1p/L10e-type protein DIP1 recruits the long noncoding RNA DANA1 and the PEAT complex to trigger histone deacetylation of drought responsive genes in Arabidopsis
GSE188134	Genome-wide maps of chromatin state in Col-0, jmj28 mutant, and atx1/2 mutant [Histone ChIP-seq]
GSE188139	Genome-wide occupancy of JMJ28 in Arabidopsis [JMJ28_ChIP_seq]
GSE188141	Arabidopsis mutants
GSE188732	Phytochrome B regulates reactive oxygen signaling during stress in plants.
GSE188852	Plants grow in lunar regolith
GSE189707	The lncRNA DANA2 interacts with the transcription factor ERF84 to regualte drought response in Arabidopsis
GSE189793	Transcript analysis under calcium deficiency in 6 day old Marchantia polymorpha wildtype (Tak-1) and Gβ-null mutant (gpb1-2) gemmalings and inter-species comparison of M. polymorpha, Arabidopsis and lettuce under calcium deficiency
GSE189933	RNA-Seq analysis of Col-0, VQ28OE9 and VQ28KO12
GSE190317	Systematic histone H4 replacement in Arabidopsis thaliana reveals a role for H4R17 in regulating flowering time
GSE190467	A Fungal Effector Suppresses the Nuclear Export of AGO1-miRNA Complex to Promote Infection in Plants
GSE191303	Transcriptomic profile of FERONIA mutant treated with Aradopside
GSE192429	MSH1 disruption in plants triggers RdDM-mediated reprogramming of phenotypic plasticity (RNA-Seq)
GSE192432	MSH1 disruption in plants triggers RdDM-mediated reprogramming of phenotypic plasticity (Bisulfite-Seq II)
GSE192568	Genome-wide binding patterns of the Plastid-encoded polymerase in Arabidopsis
GSE192608	Function of ARGONAUTE proteins in the Arabidopsis shoot apical meristem (SAM) [RNA-seq]
GSE192609	Function of ARGONAUTE proteins in the Arabidopsis shoot apical meristem (SAM) [seedling RNA-seq]
GSE192611	Function of ARGONAUTE proteins in the Arabidopsis shoot apical meristem (SAM)
GSE193111	Transcriptome analysis of sweet1 seeds upon treatments during germination
GSE193243	Three classes of Arabidopsis SWI/SNF chromatin remodeling complexes differentially regulate development by affecting chromatin accessibility [ChIP-Seq]
GSE193251	Components of the autonomous flowering pathway form a complex that suppresses FLC transcription by regulating multiple histone modifications [ChIP-seq]
GSE193253	Components of the autonomous flowering pathway form a complex that suppresses FLC transcription by regulating multiple histone modifications
GSE193345	RNAseq analysis of the transcriptome of an Arabidopsis mutant, ahl13, elicitated by pstDC3000 or flg22
GSE193396	Three classes of Arabidopsis SWI/SNF chromatin remodeling complexes differentially regulate development by affecting chromatin accessibility [ATAC-Seq]
GSE193397	Three classes of Arabidopsis SWI/SNF chromatin remodeling complexes differentially regulate development by affecting chromatin accessibility
GSE193451	Cell type-specific attenuation of brassinosteroid signaling precedes stomatal asymmetric cell division
GSE193611	Genome-wide occupancy of ATX2 in Arabidopsis
GSE193793	The Arabidopsis NuA4 histone acetyltransferase complex is required for chlorophyll biosynthesis and photosynthesis. [ChIP-Seq]
GSE193794	The Arabidopsis NuA4 histone acetyltransferase complex is required for chlorophyll biosynthesis and photosynthesis.
GSE193955	PHYTOCHROME-INTERACTING FACTOR 7-mediated epigenetic reprogramming promotes the transcriptional response to shade in Arabidopsis
GSE194055	Dual specificity and target gene selection by the MADS domain protein FRUITFULL
GSE195735	Genome-widebinding maps of arabidopsis KYP
GSE196370	RNAseq for WT and xip mutant in mock, HU and BLM treatment
GSE197063	A gene silencing screen uncovers diverse tools for targeted gene repression in Arabidopsis
GSE197077	Plant mRNAs move into a fungal pathogen via extracellular vesicles to reduce infection
GSE197154	Transcriptomic analysis of IAA treated 3 DAG WT and er erl2 seedlings.
GSE197245	Probing in vivo RNA structure with optimized DMS-MaPseq in rice
GSE197325	Transcriptome analysis of the symbiotic response of Arabidopsis at different temperatures.
GSE197502	Mutation of histone H3 serine 28 to alanine influences H3K27me3-mediated gene silencing in Arabidopsis thaliana
GSE197556	The Dynamic Proteome in Arabidopsis Thaliana Early Embryogenesis
GSE197790	Genome-wide binding targets of GBF2 in ER stress
GSE197898	Analyses of the transcriptional and alternative splicing changes in mdf-1 in comparison to WT via RNA sequencing
GSE198017	The receptor-like cytosolic kinase RIPK activates NADP-malic enzyme 2 to generate NADPH for fueling the ROS production
GSE198092	Transcriptome analysis of Arabidopsis Root in response to cellooligomers (cellotriose)
GSE198286	Transcriptome-wide profiling of RNA N4-cytidine acetylation in Arabidopsis thaliana and Oryza sativa
GSE198360	Silver nitrate has a measurebale but minor impact on gene expression in Arabidopsis thaliana
GSE198394	An environmentally-responsive transcriptional state modulates cell identities during root development
GSE199142	Time-series RNAseq analysis following lateral root induction by gravistimulation
GSE199757	Conserved and plant-specific GCN5-containing complexes cooperate to regulate gene transcription and plant development [ChIP-Seq]
GSE199760	Conserved and plant-specific GCN5-containing complexes cooperate to regulate gene transcription and plant development [RNA-Seq]
GSE199761	Conserved and plant-specific GCN5-containing complexes cooperate to regulate gene transcription and plant development
GSE200390	RNA-seq profiling in Arabidopsis thaliana wild-type and hrlp-2
GSE200500	PAT1-type GRAS-domain proteins control regeneration following wounding by transcriptional activation of DOF3.4 driving cell proliferation
GSE200917	The Class VIII myosin ATM1 is integral for root apical meristem function
GSE201115	Cell-type specific alternative splicing in the Arabidopsis germline
GSE201331	PICKLE-mediated nucleosome condensing drives H3K27me3 spreading for the inheritance of Polycomb memory during differentiation
GSE201374	PICKLE-mediated nucleosome condensing drives H3K27me3 spreading for the inheritance of Polycomb memory during differentiation [ChIP-Seq]
GSE201375	PICKLE-mediated nucleosome condensing drives H3K27me3 spreading for the inheritance of Polycomb memory during differentiation [ATAC-Seq]
GSE201389	COP1 SUPPRESSOR 6 promotes photomorphogenesis by repressing the transcription and activity of PIF4 and PIF5
GSE201607	Machine learning accelerates the dissection of mitostasis as a cross-species central biological hub for leaf senescence
GSE201786	Dimethylmonothioarsenate (DMMTA) is highly toxic for plants and induce strong transcriptome changes.
GSE201804	Interpreting gene co-regulation and metabolic profiling in the unique starch metabolism of Arabidopsis dpe2/phs1 mutant reveals insights into control mechanism of the starch granule number
GSE201841	Nodulin homeobox (NDX) is required for heterochromatin homeostasis in Arabidopsis
GSE202204	DDT-RELATED PROTEIN4-IMITATION SWITCH alters nucleosome distribution to relieve transcriptional silencing in Arabidopsis (ChIP-seq)
GSE202205	DDT-RELATED PROTEIN4-IMITATION SWITCH alters nucleosome distribution to relieve transcriptional silencing in Arabidopsis [RNA-Seq]
GSE202270	DDT-RELATED PROTEIN4-IMITATION SWITCH alters nucleosome distribution to relieve transcriptional silencing in Arabidopsis [Bisulfite-seq]
GSE202271	DDT-RELATED PROTEIN4-IMITATION SWITCH alters nucleosome distribution to relieve transcriptional silencing in Arabidopsis
GSE202422	Single-nucleus RNA-seq reveals that MBD5, MBD6, and SILENZIO maintain silencing in the vegetative cell of developing pollen
GSE202487	Cap-binding complex assists RNA Polymerase II transcription in plant salt stress response
GSE202552	Drug Delivery in Plants Using Silk Microneedles
GSE202802	A VEL3 histone deacetylase complex establishes a maternal epigenetic state controlling progeny seed dormancy
GSE203263	DNA polymerase epsilon interacts with SUVH2/9 to mediate meiotic DSB associated gene silencing beyond DNA methylation in Arabidopsis [BiSulfite-seq]
GSE203309	DNA polymerase epsilon interacts with SUVH2/9 to mediate meiotic DSB associated gene silencing beyond DNA methylation in Arabidopsis [RNA-seq]
GSE203325	DNA polymerase epsilon interacts with SUVH2/9 to mediate meiotic DSB associated gene silencing beyond DNA methylation in Arabidopsis [miRNA-seq]
GSE203328	DNA polymerase epsilon interacts with SUVH2/9 to mediate meiotic DSB associated gene silencing beyond DNA methylation in Arabidopsis
GSE205273	Comprehensive effects of GmVP2-overexpression on plant growth, P-remobilization and rhizosphere microbial community
GSE205524	Transcriptome comparison of Arabidopsis thaliana dark-grown B-GATA double mutant gnc gnl, and the transgenic line GNLox, in different sucrose conditions
GSE205545	Coupling of co-transcriptional splicing and 3’ end Pol II pause during termination in Arabidopsis
GSE206292	MTA mediated m6A modification promotes chilling tolerance by regulating gene translation efficiency in Arabidopsis
GSE206313	Double-haploid induction induces extensive variation in DNA methylation in Arabidopsis
GSE206323	Gene expression profiling of lignin biosynthetic mutants of Arabidopsis
GSE206798	Genome editing in plants using the compact editor CasΦ
GSE207364	Coordinated histone variant H2A.Z eviction and H3.3 deposition control plant thermomorphogenesis [RNA-seq I]
GSE207365	Coordinated histone variant H2A.Z eviction and H3.3 deposition control plant thermomorphogenesis [RNA-seq II]
GSE207366	Coordinated histone variant H2A.Z eviction and H3.3 deposition control plant thermomorphogenesis [HTR5-GFP ChIP-seq]
GSE207367	Coordinated histone variant H2A.Z eviction and H3.3 deposition control plant thermomorphogenesis
GSE207391	Transcription elongator SPT6L regulates the occupancies of the SWI2/SNF2 chromatin remodelers SYD/BRM and nucleosomes at transcription start sites in Arabidopsis
GSE207841	Nodulin homeobox (NDX) is required for heterochromatin homeostasis in Arabidopsis [Bisulfite-seq]
GSE208176	Establishing a reproducible approach to study cellular functions of plants cells with 3D bioprinting
GSE208223	Titanium nanoparticles activate a transcriptional response in Arabidopsis that enhances tolerance to low phosphate, osmotic stress and pathogen infection
GSE208555	High-light stress RNA-seq Arabidopsis thaliana
GSE208563	Conserved roles of B-GATAs in the regulation of photosynthesis and high-light stress response
GSE208755	Promoter-pervasive transcription causes RNA polymerase II pausing to boost DOG1 expression in response to salt
GSE209584	Transcriptional repression of GTL1 by water-deficit stress promotes anthocyanin and polyamine biosynthesis to enhance drought tolerance
GSE209593	CAN OF SPINACH, a novel long non-coding RNA, affects iron deficiency responses in Arabidopsis thaliana (RNA-Seq)
GSE209594	CAN OF SPINACH, a novel long non-coding RNA, affects iron deficiency responses in Arabidopsis thaliana (small RNA-Seq)
GSE209595	CAN OF SPINACH, a novel long non-coding RNA, affects iron deficiency responses in Arabidopsis thaliana
GSE209638	Arabidopsis histone variant H3.3 establishes a proper chromatin regulatory landscape essential for post-embryonic development [ATAC-seq (h2a.z)]
GSE209640	Arabidopsis histone variant H3.3 establishes a proper chromatin regulatory landscape essential for post-embryonic development [ATAC-seq (h3.3ko)]
GSE209641	Arabidopsis histone variant H3.3 establishes a proper chromatin regulatory landscape essential for post-embryonic development [Bisulfite-seq]
GSE209642	Arabidopsis histone variant H3.3 establishes a proper chromatin regulatory landscape essential for post-embryonic development [ChIP-Seq]
GSE209645	Arabidopsis histone variant H3.3 establishes a proper chromatin regulatory landscape essential for post-embryonic development
GSE210893	Genome-wide expression analysis of Arabidopsis Col-0 plants under BTH treatment and high or low humidity
GSE211540	The blue light receptor CRY1 interacts with FIP37 to promote N6-methyladenosine RNA modification and photomorphogenesis in Arabidopsis
GSE211896	Global co-function network of plant autophagy pathway
GSE212020	HD2B and HD2C interact with Argonaute 4 to promote tolerance and heterochromatin stabilization during heat stress [BS-Seq]
GSE212022	HD2B and HD2C interact with Argonaute 4 to promote tolerance and heterochromatin stabilization during heat stress
GSE212230	Single-cell RNA-seq of brassinosteroid response in Arabidopsis roots
GSE212362	The N-terminal extension of Arabidopsis ARGONAUTE 1 is essential for microRNA activities [RNA_seq]
GSE212365	The N-terminal extension of Arabidopsis ARGONAUTE 1 is essential for microRNA activities
GSE212784	The role of H3K4me3 of low temperature memory in Arabidopsis [ChIP-Seq]
GSE212801	MORC proteins regulate transcription factor binding through mediating chromatin compaction at active chromatin regions
GSE213025	RNAseq for WT, mrg1 mrg2, pif4, and mrg1 mrg2 pif4 plants under different temperature
GSE213185	Activation of a singlet oxygen signaling pathway by competition cues in Arabidopsis thaliana
GSE213405	MORF2 is a key effector of plastidial retrograde signaling for stress response and plant morphogenesis beyond RNA editing
GSE213583	A simple but robust approach for isolating chromatin associated RNAs in Arabidopsis thaliana
GSE213622	Single-cell profiling of complex plant responses to Pseudomonas syringae infection [scRNA-seq]
GSE213625	Single-cell profiling of complex plant responses to Pseudomonas syringae infection
GSE213764	Low dose ribosomal DNA P-loop mutation affects development and enforces autophagy in Arabidopsis
GSE213783	Genome-wide occupancy of ATX2 in Arabidopsis 2
GSE213785	H3K9me2 level in WT, jmj28-2.
GSE213934	Condensation of SEUSS promotes hyperosmotic stress tolerance in Arabidopsis
GSE214299	An SWAP1-SFPS-RRC1 splicing factor complex modulates pre-mRNA splicing to promote photomorphogenesis in Arabidopsis
GSE214377	Plants grown in Kennedy Fixation Tubes (KFT)
GSE215135	Chromatin attachment to the nuclear matrix represses hypocotyl elongation in Arabidopsis thaliana
GSE215151	RNA-seq Analysis of 14-day-old WT, bcl7a(brip3), bcl7b(brip4), bcl7a bcl7b(brip3 brip4), bcl7a bcl7b brm-3(brip3 brip4 brm-3) and bcl7a bcl7b brm-1(brip3 brip4 brm-1) seedlings under short day condition
GSE215295	BCL7A and BCL7B potentiate SWI/SNF-complex-mediated chromatin accessibility to regulate gene expression and vegetative phase transition in plants
GSE215443	Primase excites the competition of templating transcription and lagging replication to boost DNA damage
GSE215743	Enzymatic Methylation Sequencing of Wt and mutant Arabidopsis plants grown at elevated carbon dioxide levels
GSE215799	RNA-seq for Col-0, atchz1ab, hta9-1hta11-2, atchz1ab hta9-1hta11-2, arp6-1, atchz1ab arp6-1
GSE215800	ChIP-seq for Col-0, atchz1ab, and arp6-1 using H2A.Z and H3 antibodies
GSE216170	DNA polymerase ε harmonizes topological states and R-loops formation to maintain genome integrity in Arabidopsis
GSE216360	MicroRNA156 conditions auxin sensitivity to enable growth plasticity in response to environmental changes in Arabidopsis (RNA-Seq)
GSE216362	MicroRNA156 conditions auxin sensitivity to enable growth plasticity in response to environmental changes in Arabidopsis
GSE216563	ChIP-seq analysis of OGDH1 occupancy in the Arabidopsis genome
GSE216739	An evolutionarily conserved transcription factor controlling leaf vein growth in flowering plants (VDof1 ChIP-seq)
GSE217158	Functions of four members of PHR1 family in plant responses to phosphate starvation
GSE217476	Conserved and plant-specific GCN5-containing complexes cooperate to regulate gene transcription and plant development [H3K14Ac ChIP-seq]
GSE217485	Conserved and plant-specific GCN5-containing complexes cooperate to regulate gene transcription and plant development [30d RNA-seq]
GSE217682	DDM1-facilitated R-loop resolution and H2A.Z exclusion primes heterochromatin formation in Arabidopsis [ssDRIP-seq, WGBS-seq, ChIP-seq]
GSE218148	DDM1-facilitated R-loop resolution and H2A.Z exclusion primes heterochromatin formation in Arabidopsis
GSE218342	AGO10-dependent gene expression under cytokinin treatment and control conditions
GSE218962	Transcriptome analysis Arabidopsis Col-0 plants grown in presence of SynComCol-0, SynCommfec and under axenic condition in Gnotopot growth system
GSE218963	Transcriptome analysis Arabidopsis Col-0 plants grown in gnotobiotic growth system
GSE219068	mDRIP-seq: a high-throughput method for R-loop mapping and quantitative assessment
GSE219071	mDRIP-seq is a high-throughput method for quantitative R-loop landscape profiling
GSE220489	Dual Roles for CND1 in Maintenances of Nuclear and Chloroplast Genome Stability in Plants [ChIP-seq]
GSE220491	Dual Roles for CND1 in Maintenances of Nuclear and Chloroplast Genome Stability in Plants
GSE220945	Co-condensation with photoexcited Cryptochromes facilitates MOS4-associated complex subunits 3A/3B to antagonize HY5 activities during photomorphogenesis in Arabidopsis
GSE221143	Programmable RNA N6-methyladenosine editing with CRISPR/dCas13a in plants
GSE221446	Increased long-distance interactions related to heterotic expression in Arabidopsis hybrids
GSE221657	Coordinated histone variant H2A.Z eviction and H3.3 deposition control plant thermomorphogenesis [RNA-seq III]
GSE221658	A group of WRKY transcription factors form a protein complex with PHD-containing proteins to repress the transcription of stress responsive genes [RNA-Seq]
GSE221659	A group of WRKY transcription factors form a protein complex with PHD-containing proteins to repress the transcription of stress responsive genes [ChIP-Seq]
GSE221660	A group of WRKY transcription factors form a protein complex with PHD-containing proteins to repress the transcription of stress responsive genes
GSE221661	The large GTPase AtGBPL3 links nuclear envelope formation to lamina-associated gene silencing [RNA-seq]
GSE221668	The large GTPase AtGBPL3 links nuclear envelope formation to lamina-associated gene silencing [ChIP-Seq]
GSE221669	The large GTPase AtGBPL3 links nuclear envelope formation to lamina-associated gene silencing
GSE221679	The MOM1 complex recruits the RdDM machinery via MORC6 to establish de novo DNA methylation.
GSE221829	Targeted DNA demethylation of the Arabidopsis genome using the SunTag-dCpf1-TET1cd system
GSE221846	Photoperiodic Transcriptome of Arabidopsis thaliana
GSE222132	Increased long-distance interactions related to heterotic expression in Arabidopsis hybrids (clf)
GSE222562	The vacuolar sugar transporter EARLY RESPONSE TO DEHYDRATION 6-LIKE4 regulates fructose signaling and plant growth
GSE222644	m6A-seq and RNA-seq in Arabidopsis dcl1 mutant
GSE223169	Arabidopsis HOT3/eIF5B1 constrains rRNA RNAi by facilitating 18S rRNA maturation during translation initiation (RNA-Seq)
GSE223172	Arabidopsis HOT3/eIF5B1 constrains rRNA RNAi by facilitating 18S rRNA maturation during translation initiation
GSE223308	ChIP-seq for HA-HTR5/Col-0 and Col-0 using HA antibody
GSE223330	The novel chloroplast glucose transporter pGlcT2 affects adaptation to extended light periods
GSE223810	An evolutionary epigenetic clock in plants [Accessions]
GSE223850	Heat shock response and transposon control in plant shoot stem cells [Bisulfite-seq]
GSE223862	An evolutionary epigenetic clock in plants
GSE223914	Heat shock response and transposon control in plant shoot stem cells [RNA-seq]
GSE223915	Heat shock response and transposon control in plant shoot stem cells
GSE224451	The N-terminal extension of Arabidopsis ARGONAUTE 1 is essential for microRNA activities [mRNA]
GSE224481	The N-terminal extension of Arabidopsis ARGONAUTE 1 is essential for microRNA activities II
GSE224761	Population-level annotation of lncRNAs in Arabidopsis thaliana reveals extensive expression and epigenetic variability associated with TE-like silencing
GSE225023	Effect of depletion of BBX14 or GLK on gene expression in seedlings pre-grown for 3 days in the dark and then shifted to 1 day in the light
GSE225039	Effect of depletion of BBX14 or GLK on gene expression in seedlings
GSE225107	Extracellular pyridine nucleotides mediate systemic acquired resistance in Arabidopsis thaliana
GSE225118	A pan-grass transcriptome reveals patterns of cellular divergence in crops
GSE225299	The soil emergence-related transcription factor PIF3 regulates root penetration by interacting with the receptor kinase FER
GSE225407	Rapid systemic responses of Arabidopsis to waterlogging stress are mediated by the ROS wave
GSE225480	H1 restricts euchromatin-associated methylation pathways from heterochromatic encroachment
GSE226097	A Single-Nucleus Atlas of Seed-to-Seed Development in Arabidopsis
GSE226144	Arabidopsis Shoot versus Root transcriptome
GSE226508	Guidelines for performing Ribosome Profling in Plants Including Structural Analysis of rRNA fragments
GSE226560	Population-level annotation of lncRNAs in Arabidopsis thaliana reveals extensive expression and epigenetic variability associated with TE-like silencing [Bisulfite-seq]
GSE226682	Population-level annotation of lncRNAs in Arabidopsis thaliana reveals extensive expression and epigenetic variability associated with TE-like silencing [ChIP-Seq]
GSE226731	Distinct transcript profiles of adventitious root competence zones
GSE226826	Time-resolved single-cell and spatial gene regulatory atlas of plants under pathogen attack
GSE227074	DDT-RELATED PROTEIN4-IMITATION SWITCH alters nucleosome distribution to relieve transcriptional silencing in Arabidopsis [MNase-seq]
GSE227150	Light-induced LLPS of the CRY2/SPA1/FIO1 complex regulating mRNA methylation and chlorophyll homeostasis in Arabidopsis
GSE227500	Genetic and molecular regulation of increased photosynthetic cell number contributes to leaf size heterosis in Arabidopsis
GSE227628	To identify potential ubiquitin ligases that regulate BIK1 homeostasis
GSE227820	Auxin coreceptor IAA17/AXR3 controls cell elongation in Arabidopsis thaliana root by modulation of auxin and gibberellin perception
GSE228224	Chloroplast nucleoid is organized by membrane association of transcribed genes [ATAC]
GSE228226	Chloroplast nucleoid is organized by membrane association of transcribed genes [ChIP]
GSE228227	Chloroplast nucleoid is organized by membrane association of transcribed genes [HIC]
GSE228228	Chloroplast nucleoid is organized by membrane association of transcribed genes [IPOD]
GSE228229	Chloroplast nucleoid is organized by membrane association of transcribed genes [SOLINA]
GSE228230	Chloroplast nucleoid is organized by membrane association of transcribed genes
GSE228349	The genes expression in WT and XBAT31 mutant under normal and high temperature at reproductive stage of Arabidopsis.
GSE228358	PLETHORA transcription factors promote early embryo development through induction of meristematic potential
GSE228510	CWC15 is required for miRNA accumulation
GSE228893	On salt stress PLETHORA signalling maintains root meristems
GSE228905	The SOS2–SERRATE module maintains miRNA homeostasis under salt stress
GSE229217	Genome-wide analysis of stress-responsive genes and alternative splice variants in Arabidopsis roots under osmotic stresses
GSE229461	TONSOKU is required for the maintenance of repressive epigenetic modifications in Arabidopsis [BS-seq]
GSE229466	TONSOKU is required for the maintenance of repressive epigenetic modifications in Arabidopsis [ChIP-Seq]
GSE229474	TONSOKU is required for the maintenance of repressive epigenetic modifications in Arabidopsis [MNase-seq]
GSE229477	TONSOKU is required for the maintenance of repressive epigenetic modifications in Arabidopsis [RNA-Seq]
GSE229479	TONSOKU is required for the maintenance of repressive epigenetic modifications in Arabidopsis
GSE229511	DSF effects on Arabidopsis
GSE229519	JANUS, a spliceosome-associated protein, promotes miRNA biogenesis in Arabidopsis
GSE229873	BS-seq and H3K9me2 ChIP-seq in Arabidopsis after flavopiridol (FLA) treatment
GSE229881	An RdDM-independent function of Pol V transcripts in gene regulation and plant defense
GSE230257	Transcriptome profiling of mkk3-1 and mpk7_ko3 seeds in Arabidopsis thaliana
GSE230392	Transcriptome profiling of erf4 seeds in Arabidopsis thaliana
GSE232248	Non-pathogenic leaf-colonising bacteria elicit plant immune responses in a colonisation density-dependent manner
GSE232251	Non-pathogenic and pathogenic leaf-colonising bacteria elicit qualitatively similar responses
GSE232254	Non-pathogenic leaf-colonising bacteria elicit pathogen-like responses in a colonisation density-dependent manner
GSE232670	Dual roles of the Arabidopsis PEAT complex in histone H2A deubiquitination and H4K5 acetylation [ChIP-seq]
GSE232671	Dual roles of the Arabidopsis PEAT complex in histone H2A deubiquitination and H4K5 acetylation [RNA-seq]
GSE232672	Dual roles of the Arabidopsis PEAT complex in histone H2A deubiquitination and H4K5 acetylation
GSE232803	Parental conflict driven regulation of endosperm cellularization by a family of Auxin Response Factors
GSE232806	CFH1 tethers the circadian clock to red light dependent photomorphogenesis
GSE233265	Evolutional heterochromatin condensation delineates chromocenter formation and retrotransposon constraint in plants
GSE233415	Effect of BRM on BR-regulated gene expression during growth and development in Arabidopsis
GSE233416	Genome-wide profiling of BRAHMA (BRM), BZR1, H3K4me3, H3K27me3, and H4K5ac with indicated growth conditions
GSE233480	Effect of nano-hydroxyapatite and phosphate on thorium toxicity – Arabidopsis transcriptomic study
GSE233555	Calibrated ribosome profiling assesses the dynamics of ribosomal flux on transcripts
GSE233562	Transcriptomic and proteomic analyses of distinct Arabidopsis organs reveal high PSI-NDH complex accumulation in stems
GSE233781	A conserved Pol II elongator SPT6L mediates Pol V transcription to regulate RNA-directed DNA methylation in Arabidopsis
GSE233927	Comparative analysis of nascent transcription among plant species
GSE233961	TONSOKU is required for the maintenance of repressive epigenetic modifications in Arabidopsis [ChIPSeq-H3K27me3]
GSE234530	ACD15, ACD21 and SLN regulate accumulation and mobility of MBD6 to silence genes and transposable elements [RNA-seq]
GSE234531	ACD15, ACD21 and SLN regulate accumulation and mobility of MBD6 to silence genes and transposable elements [ChIP-seq]
GSE234532	ACD15, ACD21 and SLN regulate accumulation and mobility of MBD6 to silence genes and transposable elements
GSE235053	Loss of H3.1K27me1 in Arabidopsis confers resistance to Geminivirus by sequestering DNA repair proteins onto host genome [ChIP-seq]
GSE235141	Loss of H3.1K27me1 in Arabidopsis confers resistance to Geminivirus by sequestering DNA repair proteins onto host genome [RNA-seq]
GSE235158	Loss of H3.1K27me1 in Arabidopsis confers resistance to Geminivirus by sequestering DNA repair proteins onto host genome
GSE235494	Multiome in the same cell revealed the impact of osmotic stress on Arabidopsis root tip development at single-cell level [ATAC]
GSE235495	Multiome in the same cell revealed the impact of osmotic stress on Arabidopsis root tip development at single-cell level [RNA]
GSE235510	Multiome in the same cell revealed the impact of osmotic stress on Arabidopsis root tip development at single-cell level
GSE235656	Peptidyl-prolyl isomerase Cyclophilin 71 promotes SERRATE phase separation and miRNA processing in Arabidopsis [mRNA-Seq]
GSE235657	Peptidyl-prolyl isomerase Cyclophilin 71 promotes SERRATE phase separation and miRNA processing in Arabidopsis
GSE236025	PICKLE RELATED 2 is a neofunctionalised gene duplicate under positive Darwinian selection with antagonistic effects to the ancestral PICKLE gene on the seed transcriptome
GSE236290	MBD2 couples DNA methylation to Transposable Elements silencing during male gametogenesis
GSE236463	Genome-wide expression analysis of Arabidopsis Col-0 plants under different air humidity
GSE237670	Effect of the gi-2 mutation on Arabidopsis thaliana gene expression
GSE239281	The root-colonizing endophyte Piriformospora indica supports nitrogen-starved Arabidopsis seedlings with N metabolites
GSE239462	Function of ARGONAUTE proteins in the Arabidopsis shoot apical meristem (SAM).
GSE239633	Arabidopsis thaliana gene expression changes upon chitosan and CAPE treatments
GSE239725	Dynamic histone modifications establish the two phase kinetics of glucosinolates against wounding stress in Arabidopsis plant
GSE239827	The comparison for the transcript levels of chloroplast-encoded genes between wild type (Col-0) and pbf8 mutants
GSE239993	The long non-coding RNA LINDA restrains cellular collapse following DNA damage in Arabidopsis thaliana
GSE240683	Effect of Serendipita indica-infection on the gene expression in wild-type and YUC9 overexpressing Arabidopsis thaliana plants
GSE241248	Serrate modulates N6-Methyladenosine (m6A) RNA modification in Arabidopsis
GSE241902	Effect of short- and long-term Serendipita indica-infections on the gene expression in wild-type Arabidopsis thaliana plants
GSE242292	Effect of Serendipita indica-infection on the gene expression in wild-type and cbl7 knockout mutants Arabidopsis thaliana plants
GSE242309	ChIP-seq for PIF4-HA plants under different temperatures.
GSE242681	Single-plant-omics reveals the cascade of transcriptional changes during the vegetative-to-reproductive transition
GSE242932	The apocarotenoid β-ionone regulates the transcriptome of Arabidopsis thaliana and increases its resistance against Botrytis cinerea
GSE243032	CRWN nuclear lamina components maintain the H3K27me3 landscape and promote successful reproduction in Arabidopsis
GSE243205	RNAseq experiment to identify differentially expressed genes in dvl/rtfl mutants and DVL overexpresion lines in inflorescence apices of Arabidopsis thaliana
GSE243296	Asymmetric bulges within hairpin RNA transgenes influence small RNA size, secondary siRNA production and viral defence II
GSE243297	Asymmetric bulges within hairpin RNA transgenes influence small RNA size, secondary siRNA production and viral defence
GSE243365	mRNA ADENOSINE METHYLASE promotes drought tolerance through N6-methyladenosine-dependent and independent impacts on mRNA regulation in Arabidopsis
GSE243403	Regulation of histone deacetylase activity by serine phosphorylation conserved in Arabidopsis and human
GSE243470	Distinct guard cell specific remodeling of chromatin accessibility during abscisic acid and CO2 dependent stomatal regulation (ATAC-Seq)
GSE243472	Distinct guard cell specific remodeling of chromatin accessibility during abscisic acid and CO2 dependent stomatal regulation (RNA-Seq)
GSE243473	Distinct guard cell–specific remodeling of chromatin accessibility during abscisic acid– and CO2-dependent stomatal regulation
GSE243494	Transcriptomic analysis of EPFL and Cycloheximide treated clv3 epfl1 epfl2 epfl4 epfl6 mutants
GSE243624	Integrated comparative transcriptome and physiological analysis reveals the mechanisms underlying genotype variations in ammonium tolerance
GSE243804	aChIP: efficient, sensitive, robust ChIP-seq for economically important plant organs [ChIP-Seq]
GSE243806	aChIP: efficient, sensitive, robust ChIP-seq for economically important plant organs
GSE244009	An improved terminal ribose-modified small RNA sequencing (TRM-sRNA-seq) reveals novel features of miRNA modification and identifies HEN1-independent 2’-O-modified sRNAs derived from tRNAs
GSE244250	Overexpression of BEH2 regulates a much broader range of gene expression than BZR1
GSE244763	FUST1 is a heat-responsive switch for global translation in plants
GSE245738	SAC-seq for transcriptome-wide quantitative sequencing of mRNA m6A at base resolution in Arabidopsis
GSE246997	AtSDR4L and DIG1 interact with VAL2 to promote seed-to-seedling transition
GSE247053	A pair of NUCLEAR FACTOR Y transcription factors act as positive regulators in jasmonate signaling and disease resistance in Arabidopsis
GSE247054	A pair of NUCLEAR FACTOR Y transcription factors act as positive regulators in jasmonate signaling and disease resistance in Arabidopsis
GSE247055	A pair of NUCLEAR FACTOR Y transcription factors act as positive regulators in jasmonate signaling and disease resistance in Arabidopsis
GSE247158	The MADS-box genes SOC1 and AGL24 antagonize XAL2 functions in Arabidopsis thaliana root development
GSE247174	Genome-wide transcriptome and epigenome data analysis of kaku4-2 mutant and WT plants
GSE247328	PELOTA and HBS1 suppress co-translational messenger RNA decay in Arabidopsis [mRNA-Seq]
GSE247329	PELOTA and HBS1 suppress co-translational messenger RNA decay in Arabidopsis [GMUCT]
GSE247330	PELOTA and HBS1 suppress co-translational messenger RNA decay in Arabidopsis
GSE247357	The ALOG domain defines a new family of plant-specific Transcription Factors acting during Arabidopsis flower development.
GSE247732	GENOMES UNCOUPLED PROTEIN1 binds to plastid RNAs and promotes their maturation
GSE248204	Transient restriction of intercellular communication is required for root regeneration
GSE248337	RNA-seq profiling in Arabidopsis thaliana wild-type and cpl2-2
GSE248400	Assaying effector cell-to-cell mobility in plant tissues identifies hypermobility and indirect manipulation of plasmodesmata
GSE248561	RNA-seq experiment of wild-type (WT) and sr34a-1 mutant germinated seeds grown for 44 hours and exposed or not to ABA for 2 hours.
GSE248563	sr34a-1 mutant germinated seeds and exposure to ABA
GSE248801	The Daily timetable of gene expression rhythms undergoes programmed warping toward the nighttime pattern in aged Arabidopsis
GSE249446	Bulk RNA-sequencing of hypocotyl explants and hypocotyl explant-derived calli of Arabidopsis
GSE249447	Bulk RNA-sequencing of hypocotyl explant-derived calli of Arabidopsis WT and rap2.12-2
GSE249562	Imprinting but not cytonuclear interactions affects parent-of-origin effect on seed size in Arabidopsis hybrids
GSE249766	HB21 induction in Arabidopsis inflorescence apexes
GSE250299	Transcriptome and epigenome data analysis to reveal the key role of KAKU4 during leaf senescence in Arabidopsis
GSE250418	A light signaling factor, ELONGATED HYPOCOTYL 5 (HY5) interacts with Histone deacetylase 9 (HDA9) to play a suppressive role in the glucosinolate biosynthesis in Arabidopsis
GSE252623	BCL7A and BCL7B potentiate SWI/SNF-complex-mediated chromatin accessibility to regulate gene expression and vegetative phase transition in plants
GSE252832	Antisense transcription from stress-responsive transcription factors fine-tunes the cold response in Arabidopsis
GSE252913	Dynamic evolution of the heterochromatin sensing histone demethylase IBM1
GSE252996	ChIP-seq for Col-0 and pif4 using H3K9ac/H4K5ac antibodies.
GSE253043	Phytochrome C And Low Temperature Promote The Expression And Red Light Signaling Of Phytochrome D
GSE253236	Phytochrome C and Low Temperature Promote the Expression and Red Light Signaling of Phytochrome D
GSE253263	MPK4 mediated phosphorylation of PIF4 controls thermosensing by regulation of H2A.Z deposition in Arabidopsis
GSE254973	Effect of high temperature on Arabidopsis thaliana root tips
GSE255443	Cold stress induces rapid gene-specific changes in the levels of H3K4me3 and H3K27me3 in Arabidopsis thaliana
GSE255445	Cold stress induces rapid gene-specific changes in the levels of H3K4me3 and H3K27me3 in Arabidopsis thaliana
GSE255979	A Mobile miR160-Triggered Transcriptional Axis Controls Root Stem Cell Niche Maintenance and Regeneration in Arabidopsis
GSE258772	RNA-seq and ChIP-seq H3K4me1 H3K4me2 H3K4me3 for Col-0
GSE259283	pTAC3 and pTAC14 are required for binding of Plastid Encoded RNA Polymerase to DNA
GSE260819	Epigenetic and transcriptional consequences in the endosperm of chemically induced transposon mobilization in Arabidopsis
GSE260820	Epigenetic and transcriptional consequences of chemically induced transposon mobilization in the endosperm (WGBS aerial)
GSE260822	Epigenetic and transcriptional consequences in the endosperm of chemically induced transposon mobilization in Arabidopsis
GSE260960	Effect of Fusarium sp. strain K-23-infection on the gene expression in Arabidopsis thaliana plants under control and salt stress conditions
GSE262902	Transcriptome analysis revealed that Arabidopsis model plant invokes the activation of heat shock proteins and ER stress response against cesium stress
GSE263276	Early N-hydroxy-pipecolic acid transcriptional profile
GSE263310	Replacement of Arabidopsis H2A.Z with human H2A.Z orthologs reveals extensive functional conservation and limited importance of the N-terminal tail sequence for Arabidopsis development (WT, h2a.z, h2a.z + AtHTA11 RNA-Seq)
GSE263311	Replacement of Arabidopsis H2A.Z with human H2A.Z orthologs reveals extensive functional conservation and limited importance of the N-terminal tail sequence for Arabidopsis development (WT, h2a.z + HsH2A.Z. RNA-Seq)
GSE263312	Replacement of Arabidopsis H2A.Z with human H2A.Z orthologs reveals extensive functional conservation and limited importance of the N-terminal tail sequence for Arabidopsis development (ChIP-Seq)
GSE263313	Replacement of Arabidopsis H2A.Z with human H2A.Z orthologs reveals extensive functional conservation and limited importance of the N-terminal tail sequence for Arabidopsis development
GSE263964	Integrative phenotyping approaches to unmask the Phyb-PIF4 pathway in Arabidopsis thaliana reproductive organs at high ambient temperatures
GSE264581	mRNA profiling in dss1(I) and dss1(V) mutant lines of Arabidopsis thaliana under oxidative stress (hydrogen peroxide)
GSE264734	Metabolic enzymes moonlight as selective autophagy receptors to protect plants against viral induced cellular damage
GSE267567	PICKLE-mediated nucleosome condensing drives H3K27me3 spreading for the inheritance of Polycomb memory during differentiation [Mnase-Seq]
GSE267571	PICKLE-mediated nucleosome condensing drives H3K27me3 spreading for the inheritance of Polycomb memory during differentiation [RNA-Seq]
GSE268032	Temporal and spatial frameworks supporting plant responses to vegetation proximity
GSE268410	Uracil phosphoribosyltransferase is required to establish a functional cytochrome b6/f complex
GSE268716	ARID1 is required to regulate and reinforce H3K9me2 in sperm cells in Arabidopsis
GSE268785	PHYTOCHROME-INTERACTING FACTOR 7 and RELATIVE OF EARLY FLOWERING 6 act in shade avoidance memory in Arabidopsis
GSE270516	The effect of constitutive root isoprene emission on root phenotype and physiology under control and salt stress conditions
GSE271929	Temporal profiling of the phosphate starvation response in Arabidopsis root hair cells reveals that induction of polycomb target genes does not depend on removal of H3K27me3 or H2A.Z I
GSE271931	Temporal profiling of the phosphate starvation response in Arabidopsis root hair cells reveals that induction of polycomb target genes does not depend on removal of H3K27me3 or H2A.Z II
GSE271960	Temporal profiling of the phosphate starvation response in Arabidopsis root hair cells reveals that induction of polycomb target genes does not depend on removal of H3K27me3 or H2A.Z IV
GSE271992	Temporal profiling of the phosphate starvation response in Arabidopsis root hair cells reveals that induction of polycomb target genes does not depend on removal of H3K27me3 or H2A.Z V
GSE271993	Temporal profiling of the phosphate starvation response in Arabidopsis root hair cells reveals that induction of polycomb target genes does not depend on removal of H3K27me3 or H2A.Z
GSE274190	RNA quality control by CCR4 safeguards chromatin integrity and centromere function in Arabidopsis [ChIP-seq]
GSE274191	RNA quality control by CCR4 safeguards chromatin integrity and centromere function in Arabidopsis [RNA-seq]
GSE274192	RNA quality control by CCR4 safeguards chromatin integrity and centromere function in Arabidopsis [smallRNA-seq]
GSE274196	RNA quality control by CCR4 safeguards chromatin integrity and centromere function in Arabidopsis [EM-seq]