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Series GSE220659 Query DataSets for GSE220659
Status Public on Oct 13, 2023
Title Activation of Coagulation and Proinflammatory Pathways in Thrombosis with Thrombocytopenia Syndrome and Following COVID-19 Vaccination
Organisms Macaca mulatta; Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Thrombosis with thrombocytopenia syndrome (TTS) is an extremely rare but potentially serious adverse event following immunization with the adenovirus vector-based COVID-19 vaccines Ad26.COV2.S (Janssen / Johnson & Johnson) or ChAdOx1 (AstraZeneca). However, no cases of TTS have been reported in over 1.5 million individuals who received a second immunization with Ad26.COV2.S in the United States, suggesting that anti-vector immunity may reduce TTS risk. Here we show robust stimulation of platelet activation and coagulation pathways and innate immune pathways in patients with TTS but only transient activation of these pathways following vaccination. We evaluated proteomic profiles in 2 patients with TTS and transcriptomic and proteomic profiles in 20 people following an initial dose and a booster dose of Ad26.COV2.S and in 14 people who received the mRNA vaccines BNT162b2 or mRNA-1273. Initial Ad26.COV2.S vaccination induced transient activation of platelet activation and coagulation pathways and innate proinflammatory pathways that resolved by day 7. TTS patients showed enhanced and sustained upregulation of these pathways, whereas a second immunization with Ad26.COV2.S or a reduced initial dose of Ad26.COV2.S resulted in lower activation of these pathways. These data provide insight into TTS pathogenesis and suggest a potential strategy for reducing TTS risk by lowering the dose of Ad26.COV2.S.
 
Overall design 30 outbred Indian-origin adult male (10) and female (20) rhesus macaques (Macaca mulatta) were randomly allocated to groups21. Animals were 5-8 kg. All animals were housed at Bioqual, Inc. (Rockville, MD). Animals received a single immunization of 1x1011, 5x1010, 1.125x1010, or 2x109 viral particles (vp) Ad26.COV2.S (Janssen; n = 5/group) or sham (n = 10) by the intramuscular route without adjuvant at week 0. Animal studies were conducted in compliance with all relevant local, state, and federal regulations and were approved by the Bioqual Institutional Animal Care and Use Committee (IACUC). Blood, PBMC, and serum samples were collected at baseline (D1) and on days 1 (D2), 7 (D8), and 14 (D14) following vaccination.
 
Contributor(s) Aid M, Barouch DH
Citation(s) 37872311
Submission date Dec 11, 2022
Last update date Nov 09, 2023
Contact name Dan Barouch
Organization name BIDMC
Department CVVR
Lab Barouch Lab
Street address 3 Blackfan Circle
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platforms (2)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
GPL27943 Illumina NovaSeq 6000 (Macaca mulatta)
Samples (317)
GSM6808441 p20185.s064_20.14_15.072_D0
GSM6808442 p20185.s089_20.14_15.072_D1
GSM6808443 p20185.s114_20.14_15.072_D3
Relations
BioProject PRJNA910934

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE220659_2014.forGeo.csv.gz 9.3 Mb (ftp)(http) CSV
GSE220659_Cov001_cpmCounts.csv.gz 20.5 Mb (ftp)(http) CSV
GSE220659_rCov001_rawCounts.csv.gz 4.1 Mb (ftp)(http) CSV
GSE220659_sep25_mrnavax_log2cpm_counts.csv.gz 2.0 Mb (ftp)(http) CSV
GSE220659_sep25_mrnavax_rawCounts.csv.gz 783.6 Kb (ftp)(http) CSV
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Processed data are available on Series record

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