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Series GSE220883 Query DataSets for GSE220883
Status Public on Feb 03, 2023
Title Autophagy controls mucus secretion from intestinal goblet cells by alleviating ER stress [16S]
Organisms synthetic construct; mouse gut metagenome
Experiment type Other
Summary To determine how constitutively active autophagy in Becn1F121A mice affects the fecal microbiota, we performed a 16s analysis.
 
Overall design Fecal pelletes from WT and Becn1F121A mice were collected and bacteria DNA extracted.
 
Contributor(s) Shai B
Citation(s) 36738733
Submission date Dec 13, 2022
Last update date Feb 05, 2023
Contact name Shai Bel
E-mail(s) shai.bel@biu.ac.il
Organization name Bar-Ilan University
Department The Azrieli Faculty of Medicine
Street address 8 Henrietta Szold St, P.O. Box 1589
City Safed
ZIP/Postal code 1311502
Country Israel
 
Platforms (2)
GPL17769 Illumina MiSeq (synthetic construct)
GPL21051 Illumina MiSeq (mouse gut metagenome)
Samples (2)
GSM6825486 mouse feces_16S
GSM6825487 mouse feces_16S_barcode
This SubSeries is part of SuperSeries:
GSE220884 Autophagy controls mucus secretion from intestinal goblet cells by alleviating ER stress super
Relations
BioProject PRJNA911803

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE220883_RAW.tar 80.0 Kb (http)(custom) TAR (of TSV, XLSX)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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