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Series GSE222537 Query DataSets for GSE222537
Status Public on Jan 15, 2023
Title First Transcriptomic insight into the working muscles of racing pigeons during a competition flight
Organism Columba livia
Experiment type Expression profiling by high throughput sequencing
Summary The currently known homing pigeon is a result of a sharp one-sided selection for flight characteristics focused on speed, endurance, and spatial orientation. This has led to extremely well-adapted athletic phenotypes in racing birds. Here, we identify genes and pathways contributing to exercise adaptation in sport pigeons by applying next-generation transcriptome sequencing of m.pectoralis muscle samples, collected before and after a 300 km competition flight. The analysis of differentially expressed genes pictured the central role of pathways involved in fuel selection and muscle maintenance during flight, with a core set of genes: ARTN, NREP, CAV3, SLC25A30, SLC2A11. Variations in these genes may therefore be exploited for genetic improvement of the racing pigeon population towards specific categories of competition flights.
 
Overall design The present study was performed on 12 muscle samples of m. pectoralis collected from 12 racing pigeons (Columba livia). Samples were collected from adult birds never trained for racing (K; n = 5) and birds after competing in a 300 km race (E; n = 7), who have undergone earlier flight training All birds were bred, and raised on a private loft owner, at the same location, with the same environmental and feeding conditions. The E group was basketed the day before and transported to the place of release (300 km away from the loft).
 
Contributor(s) Stefaniuk-Szmukier M, Szmatoła T, Ropk-Molik K
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Submission date Jan 10, 2023
Last update date Jan 17, 2023
Contact name Monika Stefaniuk-Szmukier
E-mail(s) monika.stefaniuk@iz.edu.pl
Phone +48666081261
Organization name National Research Institution of Animal Production
Department Department of Animal Molecular Biology
Street address ul.Krakowska 1
City Balice
ZIP/Postal code 32-083
Country Poland
 
Platforms (1)
GPL29485 Illumina NovaSeq 6000 (Columba livia)
Samples (12)
GSM6925688 m.pectoralis sample, untrained [RNA_S3848Nr12]
GSM6925689 m.pectoralis sample, untrained [RNA_S3848Nr2]
GSM6925690 m.pectoralis sample, untrained [RNA_S3848Nr3]
Relations
BioProject PRJNA922484

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE222537_RAW.tar 740.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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