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Series GSE223172 Query DataSets for GSE223172
Status Public on Apr 19, 2023
Title Arabidopsis HOT3/eIF5B1 constrains rRNA RNAi by facilitating 18S rRNA maturation during translation initiation
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Other
Non-coding RNA profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 37011204
Submission date Jan 18, 2023
Last update date Apr 21, 2023
Contact name Chenjiang You
E-mail(s) chenjiang.you@ucr.edu, youchenjiang2003@hotmail.com
Organization name Fudan University
Street address 2005 Songhu Rd
City Shanghai
State/province Shanghai
ZIP/Postal code 200438
Country China
 
Platforms (3)
GPL17639 Illumina HiSeq 2500 (Arabidopsis thaliana)
GPL23157 HiSeq X Ten (Arabidopsis thaliana)
GPL26208 Illumina NovaSeq 6000 (Arabidopsis thaliana)
Samples (71)
GSM6940525 WT total ENDrep1
GSM6940526 WT total ENDrep2
GSM6940527 WT total ENDrep3
This SuperSeries is composed of the following SubSeries:
GSE223167 Arabidopsis HOT3/eIF5B1 constrains rRNA RNAi by facilitating 18S rRNA maturation during translation initiation (18S END-Seq)
GSE223168 Arabidopsis HOT3/eIF5B1 constrains rRNA RNAi by facilitating 18S rRNA maturation during translation initiation (Ribo-Seq)
GSE223169 Arabidopsis HOT3/eIF5B1 constrains rRNA RNAi by facilitating 18S rRNA maturation during translation initiation (RNA-Seq)
Relations
BioProject PRJNA925159

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE223172_RAW.tar 84.4 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp

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