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Series GSE223689 Query DataSets for GSE223689
Status Public on Jun 09, 2023
Title Mousemodel_Heptablastoma_ScRNAseq
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Lack of relevant animal models and cell lines hampers the understanding of hepatoblastoma and identification of therapeutic targets. We report a hepatoblastoma murine model that faithfully recapitulates the pathological features of mixed fetal and embryonic hepatoblastoma, with transcriptomics resembling the high-risk gene signatures of human disease
 
Overall design The Single nuclear RNAseq was performed using 10X genomics -Single cell gene expression kit V3.1.
 
Contributor(s) Yang J, Chen X, Easton J, Natarajan S, Fang J
Citation(s) 37414763
Submission date Jan 25, 2023
Last update date Sep 08, 2023
Contact name Jun Yang
Organization name St.Jude Children's Research Hospital
Department Surgery
Street address 262 Danny Thomas Place
City Memphis
State/province TN
ZIP/Postal code 38103
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (7)
GSM6973186 NEJ634
GSM6973187 NEJ638
GSM6973188 NEJ709
Relations
BioProject PRJNA927296

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE223689_RAW.tar 873.5 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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